BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21926 (UTR included)
(6226 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A1B09 1439 0.0
>BF01053A1B09
Length = 757
Score = 1439 bits (726), Expect = 0.0
Identities = 741/746 (99%)
Strand = Plus / Plus
Query: 2519 gctgcacgcgcttaaagcgttggctcaacatccgcatagggagcatctcgcgcccgcaca 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gctgcacgcgcttaaagcgttggctcaacatccgcatagggagcatctcgcgcccgcaca 71
Query: 2579 gatcgcactgatgacgtcatgggctagcgtggcaaaggaagtggcgtcagccctgggccc 2638
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 72 gatcgcactgatgacgtcatgggctagcgtggccaaggaagtggcgtcagccctgggccc 131
Query: 2639 agtagaggccggacgtataaccgcagcgatgttggatgcacctgcagcgaatgcaccacc 2698
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agtggaggccggacgtataaccgcagcgatgttggatgcacctgcagcgaatgcaccacc 191
Query: 2699 agctttggccaaggctagacttgcagcagctcaggagatattgagaggacctctgggaca 2758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agctttggccaaggctagacttgcagcagctcaggagatattgagaggacctctgggaca 251
Query: 2759 ggatcctgaggctcgaaacattgttttgacaacggcgtgtcatcacctccgagtgcatct 2818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggatcctgaggctcgaaacattgttttgacaacggcgtgtcatcacctccgagtgcatct 311
Query: 2819 cgctcgtagggacgaattaactcaatgtgcggatatgctgggagagttagtcacgttgtt 2878
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 312 cgctcgtagggacgaattaactcagtgtgcggatatgctgggagagttagtcacgttgtt 371
Query: 2879 gtggaagaaggaagatcctgatgcgcccgtggacgaggacgaactggacccggatgtaga 2938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtggaagaaggaagatcctgatgcgcccgtggacgaggacgaactggacccggatgtaga 431
Query: 2939 cgtgctctgcttaaataccctggacgtactggtcgagacggtactgcatctgattggcgg 2998
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 432 cgtgctctgcttaaataccctggacgtactggtcgagacagtattgcatctgattggcgg 491
Query: 2999 aaattcgccagtcctgggttcaatggtagctggtctactaggagtaatggaacttctaaa 3058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaattcgccagtcctgggttcaatggtagctggtctactaggagtaatggaacttctaaa 551
Query: 3059 accagctcactatcagcgtctgtggagtcacttagctccacaccctcacgacagaaagcc 3118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 accagctcactatcagcgtctgtggagtcacttagctccacaccctcacgacagaaagcc 611
Query: 3119 tttaaaagattttcttatgagggccttccttgtgtttagacatttgatagaacaggaagt 3178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tttaaaagattttcttatgagggccttccttgtgtttagacatttgatagaacaggaagt 671
Query: 3179 gtttccatctgactggatggtactcagagtgcagagctgcaaggtactgttgtctgcatt 3238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtttccatctgactggatggtactcagagtgcagagctgcaaggtactgttgtctgcatt 731
Query: 3239 acaagatttggcaaaaccgttgttag 3264
||||||||||||||||||||||||||
Sbjct: 732 acaagatttggcaaaaccgttgttag 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 77,527
Number of extensions: 7967
Number of successful extensions: 7967
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7967
Number of HSP's successfully gapped: 1
Length of query: 6226
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6208
Effective length of database: 8,109,745
Effective search space: 50345296960
Effective search space used: 50345296960
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)