BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21942 (UTR included)
(2161 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_820_C1 1830 0.0
>BF14_820_C1
Length = 964
Score = 1830 bits (923), Expect = 0.0
Identities = 953/963 (98%)
Strand = Plus / Plus
Query: 1178 aactgaccctatgattgaggtattcccgcgaatcacaaaatgtacattccacaaatacgg 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aactgaccctatgattgaggtattcccgcgaatcacaaaatgtacattccacaaatacgg 61
Query: 1238 agcctctggaactattcagaagcatgacgcgttgtgcgttcttgctttaaacatcctcaa 1297
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 62 agcctctggaactattcagaagcatgacgcgttgtgcgtacttgctttaaacatcctcaa 121
Query: 1298 tgaaaaaatcttcatattcctttggttttggtttattattctgtccgtcgtatccggcct 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgaaaaaatcttcatattcctttggttttggtttattattctgtccgtcgtatccggcct 181
Query: 1358 ggctatcgtgtattcagcagctgtcatcctcctgccaagtacacgtgaaactattctcaa 1417
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 182 ggctatcgtgtattcagcagctgtcatccttctgccaagtacacgtgaaactattctcaa 241
Query: 1418 acgtcgcttcagattcggatctccaaatggagtagaggccctcgttaagagaactcaggt 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgtcgcttcagattcggatctccaaatggagtagaggccctcgttaagagaactcaggt 301
Query: 1478 cggagatttccttctgctacacctacttggtcagaacatttcacttcgtgtttacggcga 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cggagatttccttctgctacacctacttggtcagaacatttcacttcgtgtttacggcga 361
Query: 1538 agtgttagatgaactatcgcgtcgtcttatcctgggttgtaatccaccatcagcaccctc 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agtgttagatgaactatcgcgtcgtcttatcctgggttgtaatccaccatcagcaccctc 421
Query: 1598 tacgttggaaatggcaccgatctatcccgatatcgacaaattcgccaaggaaactgagac 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tacgttggaaatggcaccgatctatcccgatatcgacaaattcgccaaggaaactgagac 481
Query: 1658 gtaagaagtaagcgacactttttccacccaaaacctagaggcctccacacattctttgag 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtaagaagtaagcgacactttttccacccaaaacctagaggcctccacacattctttgag 541
Query: 1718 aaaaaccttaatgaataccgattgttccttctttgatttctcaattgatgtatagaggcc 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaaaaccttaatgaataccgattgttccttctttgatttctcaattgatgtatagaggcc 601
Query: 1778 atattcgataatcaagtgttgcttttaaaaattgcaatgatgtaaaagaaaatatatcga 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atattcgataatcaagtgttgcttttaaaaattgcaatgatgtaaaagaaaatatatcga 661
Query: 1838 ttttattgaacatgacattcctttacgtaggccatattgttgatttcacaatcagccgca 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttttattgaacatgacattcctttacgtaggccatattgttgatttcacaatcagccgca 721
Query: 1898 ttttgccttagcaattaaagccgcagctttaagattgaggtctcaatattttaagacatt 1957
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 722 ttttgccttagtaattaaagccgcagctttaaaattgaggtctcaatattttaagacatt 781
Query: 1958 ttgtaatgacattgaaggtttgttttagcaaaatattatatgcattagtaactattggat 2017
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 782 ttgtaatgacattgaaggtttgtgttagtaaaatattatatgcattagtaactattggat 841
Query: 2018 atgaaacaaatacgtttatcgacttcgaagactgtattgtttagatatatttgaaaacta 2077
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 842 aaaaaacaaatacgtttatcgacttcgaagactgtattgtttagatgtatttgaaaacta 901
Query: 2078 ggagaaaaaatcgaagcaactgtgacaataaagtaatattcgtgtagtctgaattaatgt 2137
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 902 ggagaaaaaatcgaagcaactgtgacaataaaataatattcgtgtagtctgaattaatgt 961
Query: 2138 agt 2140
|||
Sbjct: 962 agt 964
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,721
Number of extensions: 4049
Number of successful extensions: 4049
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4049
Number of HSP's successfully gapped: 1
Length of query: 2161
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2144
Effective length of database: 8,119,229
Effective search space: 17407626976
Effective search space used: 17407626976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)