BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21973 (UTR included)
(3925 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01036X1E07 1463 0.0
>BF01036X1E07
Length = 771
Score = 1463 bits (738), Expect = 0.0
Identities = 756/762 (99%)
Strand = Plus / Plus
Query: 2558 agatgttcaattgaaattgagtgaagcggaagatgcgaggaacagaagcgaagccgcgct 2617
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 10 agatgttcaattgaaattgagtgaagcggaagatgcaaggaacagaagcgaagccgcgct 69
Query: 2618 aacaaacctgcaggtggtgttggaacagtttcagttagacaaagaaagagacatacatgc 2677
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 70 atcaaacctgcaggtggtgttggaacagtttcagttggacaaagaaagagacatacatgc 129
Query: 2678 agcgacagaaaaaatccgaaacaaaacggaagaatttagacgagccaatgaagaattacg 2737
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agcaacagaaaaaatccgaaacaaaacggaagaatttagacgagccaatgaagaattacg 189
Query: 2738 gaatgaaatctctagactacataagaagttggaggaatccagcgctggtctgaaagcggc 2797
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 190 gaatgaaatctctagactacataagaagttagaggaatccagcgctggtctgaaagcggc 249
Query: 2798 gactaggctcggagaccaggttgaaaccaaaacagctcaaatcaatgacttgaaggaaca 2857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gactaggctcggagaccaggttgaaaccaaaacagctcaaatcaatgacttgaaggaaca 309
Query: 2858 agttcgagctctacagagtacggtggcggcggcggaagagaggtactacaacgccatatc 2917
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 310 agttcgagctctacagagtacggtagcggcggcggaagagaggtactacaacgccatatc 369
Query: 2918 taaccaacaggacaaagttgataaaaacctggttaagaacctagttataaactacgtggt 2977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 taaccaacaggacaaagttgataaaaacctggttaagaacctagttataaactacgtggt 429
Query: 2978 cagttcccagaataatttgaacagaacccaaactctcagaatattgtcgacggtcctaga 3037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cagttcccagaataatttgaacagaacccaaactctcagaatattgtcgacggtcctaga 489
Query: 3038 cttcaatcagacggaatgtgaaaaacttggtctcatgaagtcgaacacttccaaggacag 3097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cttcaatcagacggaatgtgaaaaacttggtctcatgaagtcgaacacttccaaggacag 549
Query: 3098 tctggcggcggagttcgtgaagttcttacaaaacgaatccaaacctcgcgccgcactacc 3157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tctggcggcggagttcgtgaagttcttacaaaacgaatccaaacctcgcgccgcactacc 609
Query: 3158 tgatatgatgggtctcggcagtgttgccagctcacggaagagttccactgttggtccgac 3217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tgatatgatgggtctcggcagtgttgccagctcacggaagagttccactgttggtccgac 669
Query: 3218 cccagtgttcgaggcgggtcacaaacgtaatccatctaacaattcaaacaacttgctttt 3277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cccagtgttcgaggcgggtcacaaacgtaatccatctaacaattcaaacaacttgctttt 729
Query: 3278 ccataatttggacaacatggacacggcgtcacaggtatcgtt 3319
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ccataatttggacaacatggacacggcgtcacaggtatcgtt 771
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 563,323
Number of extensions: 11267
Number of successful extensions: 11267
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11267
Number of HSP's successfully gapped: 1
Length of query: 3925
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3907
Effective length of database: 8,109,745
Effective search space: 31684773715
Effective search space used: 31684773715
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)