BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21976 (UTR included)
(3907 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A2C11 1437 0.0
BF01042B2F02 999 0.0
>BF01061A2C11
Length = 782
Score = 1437 bits (725), Expect = 0.0
Identities = 763/776 (98%), Gaps = 6/776 (0%)
Strand = Plus / Plus
Query: 1309 cgagggtcgtggtggtaggggaccagtccgcggggaagacctctgtgctggagatgatcg 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 cgagggtcgtggtggtaggggaccagtccgcggggaagacctctgtgctggagatgatcg 72
Query: 1369 cacaggccaggatcttcccgaggggagcgggggagatgtgtaccagggatgtggctccgg 1428
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 73 cacaggccaggatcttcccgaggggagcgggggagatgtgtaccaggg------ctccgg 126
Query: 1429 tgaaagtgaccctatcagagggtccctaccacgtcgcccagttcagagattcatccagag 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tgaaagtgaccctatcagagggtccctaccacgtcgcccagttcagagattcatccagag 186
Query: 1489 agttcgacctcaacaaggaatctgatcttgctgatctgagaaaggaagttgagctgcgca 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 agttcgacctcaacaaggaatctgatcttgctgatctgagaaaggaagttgagctgcgca 246
Query: 1549 tgcgcaatagtgtccgcggggggagaaccgtgtctagtgacgtcatcgccatgtccgtga 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgcgcaatagtgtccgcggggggagaaccgtgtctagtgacgtcatcgccatgtccgtga 306
Query: 1609 ggggtccgggactgccccgcatggtgctggtggacttgccaggtgtcatatcgacgcaga 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggggtccgggactgccccgcatggtgctggtggacttgccaggtgtcatatcgacgcaga 366
Query: 1669 ccgtggacatggcggcggacacgagggaggcgatcaaacagatgaccaaacagtacatgg 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccgtggacatggcggcggacacgagggaggcgatcaaacagatgaccaaacagtacatgg 426
Query: 1729 acaaccccaacgcgatcatactgtgtatacaggacgggtcggtggacgccgagcgcagca 1788
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acaaccctaacgcgatcatactgtgtatacaggacgggtcggtggacgccgagcgcagca 486
Query: 1789 acgtgacggacctcgtggcctcctgcgaccctcaagggaagaggaccatctttgtgctga 1848
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 487 acgtgacggacctcgtggcctcctgcgaccctcaagggaagaggaccatcttcgtgctga 546
Query: 1849 ccaaagtggacttggctgaggagaatctcgccaaccctaacaggatccgtcgcatcctgg 1908
|||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 547 ccaaagtggatttggctgaggagaatctcgctaaccctaacaggatccgtcgtatcctgg 606
Query: 1909 aaggcaagctgttccctatgaaggcgctcggctactacgccgtagtgaccggccgcagca 1968
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 607 aaggcaagctgttccctatgaaggcgctcgggtactacgccgtagtgaccggccgcagca 666
Query: 1969 ggaaggacgactccatacagagcatcagggagtacgaagagcggttcttcagatcctcga 2028
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 667 ggaaggacgactccatacagagcatcagggagtacgaggagcggttcttcagatcctcga 726
Query: 2029 aactgtttaaagagggtctggtggcggcggggcaggtgacgacccgcaacctgtcc 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aactgtttaaagagggtctggtggcggcggggcaggtgacgacccgcaacctgtcc 782
>BF01042B2F02
Length = 822
Score = 999 bits (504), Expect = 0.0
Identities = 510/512 (99%)
Strand = Plus / Plus
Query: 2485 ataaattcaacacgtccgtcgatataaaactccgtgagtgggcggagagtgagctcgcca 2544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ataaattcaacacgtccgtcgatataaaactccgtgagtgggcggagagtgagctcgcca 340
Query: 2545 aacaatccatacaggctggtagagacgcgctaagggaagagttcatagaactgctcgcga 2604
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 341 aacaatccatacaggctggtagagacgcgctgagggaagagttcatagaactgctcgcga 400
Query: 2605 ggtcccaggacacagatcctatttacgagcctgtaaaacgagcagccgtcgaagaagctc 2664
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 401 ggtcccaggacacagatcctatttacgagcctgtgaaacgagcagccgtcgaagaagctc 460
Query: 2665 tcaacagacatcagtgggaggagagggcccaggatgttctgcgcgtgctacaactgaacg 2724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tcaacagacatcagtgggaggagagggcccaggatgttctgcgcgtgctacaactgaacg 520
Query: 2725 ccctccaggacagatgtgttcgttcccgcggcgactgggacgcggccgtggccctcatgg 2784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ccctccaggacagatgtgttcgttcccgcggcgactgggacgcggccgtggccctcatgg 580
Query: 2785 agaccgccctcaaggagaagcgagacgacgtgcagagggagctccggaacatgacaggtc 2844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agaccgccctcaaggagaagcgagacgacgtgcagagggagctccggaacatgacaggtc 640
Query: 2845 cgggcttccgtgagcgttggcttcgttgggcgtcgaccactgaggagcaacagagacggg 2904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cgggcttccgtgagcgttggcttcgttgggcgtcgaccactgaggagcaacagagacggg 700
Query: 2905 ctgaagtacgcaccgagctggagagactcggctcctgcagaccctcgctggcctacgacg 2964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ctgaagtacgcaccgagctggagagactcggctcctgcagaccctcgctggcctacgacg 760
Query: 2965 aggtggtagcggttcgcgacaaccttcgtcgt 2996
||||||||||||||||||||||||||||||||
Sbjct: 761 aggtggtagcggttcgcgacaaccttcgtcgt 792
Score = 444 bits (224), Expect = e-124
Identities = 227/228 (99%)
Strand = Plus / Plus
Query: 2167 acctggagacggagtggaagaacaccttccccaggcagcgagagctggaccgcgacgagc 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 acctggagacggagtggaagaacaccttccccaggcagcgagagctggaccgcgacgagc 112
Query: 2227 tgttcgagcgagctcgagccgagctgttggaccagtcagctgaactgtcggctgttcctc 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tgttcgagcgagctcgagccgagctgttggaccagtcagctgaactgtcggctgttcctc 172
Query: 2287 ctccggcctgggaacagaggctcacggctgaactgtggacctccacacatgacagggtct 2346
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ctccggcctgggaacagagactcacggctgaactgtggacctccacacatgacagggtct 232
Query: 2347 tcggaggaatatacctgccggcggcggcactcgcacatgatgacgtcg 2394
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tcggaggaatatacctgccggcggcggcactcgcacatgatgacgtcg 280
Score = 85.7 bits (43), Expect = 5e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 2130 gaacaacaggccgacgccttcaaggccatgaggttcaacctgg 2172
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gaacaacaggccgacgccttcaaggccatgaggttcaacctgg 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 359,423
Number of extensions: 7000
Number of successful extensions: 7000
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7000
Number of HSP's successfully gapped: 5
Length of query: 3907
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3889
Effective length of database: 8,109,745
Effective search space: 31538798305
Effective search space used: 31538798305
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)