BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21979 (UTR included)
(2548 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2081_C1 1223 0.0
>BF14_2081_C1
Length = 787
Score = 1223 bits (617), Expect = 0.0
Identities = 620/621 (99%)
Strand = Plus / Plus
Query: 736 ggttatgttttaaaaaccttacggaacaatacgttcgttttgatgatgcggtttcattgc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ggttatgttttaaaaaccttacggaacaatacgttcgttttgatgatgcggtttcattgc 226
Query: 796 acccagaaagtggtgtatttcaacctttatccgaaatattacttaaactattgggcgaca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 acccagaaagtggtgtatttcaacctttatccgaaatattacttaaactattgggcgaca 286
Query: 856 atatatgtgatgagattaagggtgttgaagctgtatgtacagattgtgtggaaaatgcat 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atatatgtgatgagattaagggtgttgaagctgtatgtacagattgtgtggaaaatgcat 346
Query: 916 tgttgtcagcccgctttgtagagaagtgccagcattcaacaaaagctttaaatgaagtgt 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgttgtcagcccgctttgtagagaagtgccagcattcaacaaaagctttaaatgaagtgt 406
Query: 976 tcaataatattagcaatactttagatgtagatattgataataaagatagcaataaaacat 1035
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 407 tcaataatattagcaatactttagatgtagatattgataataaagataacaataaaacat 466
Query: 1036 tgtatgttgtaatagaagatctagaatctaaactgttagtagtaaagaagacagatgaaa 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgtatgttgtaatagaagatctagaatctaaactgttagtagtaaagaagacagatgaaa 526
Query: 1096 gaaacagtcttcaggggacatttgaatgtgaagtgtgcacagatagttttgatacattta 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gaaacagtcttcaggggacatttgaatgtgaagtgtgcacagatagttttgatacattta 586
Query: 1156 cagatttaaaagtccataatttgaccaatcatggtactttgacatgtgacaaatgctatg 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cagatttaaaagtccataatttgaccaatcatggtactttgacatgtgacaaatgctatg 646
Query: 1216 atacatttgatagtaatactgaattttcccttcatgagagtcagcatcatgtttataaat 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atacatttgatagtaatactgaattttcccttcatgagagtcagcatcatgtttataaat 706
Query: 1276 gtcctgaatgtccacaatacagaaacacagaggagagtttagaagaccaccaaaacagac 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gtcctgaatgtccacaatacagaaacacagaggagagtttagaagaccaccaaaacagac 766
Query: 1336 ttcacaatgtttttgtatgta 1356
|||||||||||||||||||||
Sbjct: 767 ttcacaatgtttttgtatgta 787
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,502
Number of extensions: 6647
Number of successful extensions: 6647
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6647
Number of HSP's successfully gapped: 1
Length of query: 2548
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2531
Effective length of database: 8,119,229
Effective search space: 20549768599
Effective search space used: 20549768599
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)