BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21982 (UTR included)
(1708 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2991_C1 1291 0.0
BF01053B2F02 389 e-107
>BF14_2991_C1
Length = 1404
Score = 1291 bits (651), Expect = 0.0
Identities = 657/659 (99%)
Strand = Plus / Plus
Query: 657 gatcctcacagtgacagcggagcgctggccgcgctggtcggccggttgtcgccggactgc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gatcctcacagtgacagcggagcgctggccgcgctggtcggccggttgtcgccggactgc 805
Query: 717 cgggaacagaacgagtccggctcgtacctggcgagtgagctggaggcgctggagagagaa 776
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 806 cgggaacagaacgagtccggctcgtacctggcgagtgagctggaggccctggagagagaa 865
Query: 777 cagcgggcggtggacgagacggccgcgcggcttgaggtgcagctcaggaaggtcatggac 836
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 cagcgggcggtggacgagacggccgcgcggcttgaggtgcagctcaggaaggtcatggat 925
Query: 837 aggggagacgacgccagggaggaggaccgcctcatgtcgcagtggttcaacctggtgaac 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 aggggagacgacgccagggaggaggaccgcctcatgtcgcagtggttcaacctggtgaac 985
Query: 897 aagaagaacgcgctgctgaggagacagatgcagcttaacatacttgaacaagaagaggac 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 aagaagaacgcgctgctgaggagacagatgcagcttaacatacttgaacaagaagaggac 1045
Query: 957 ctgagtcgtcgctgtgagctgcttgcgagggagctgcggctgtcgctgggggtggaggag 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 ctgagtcgtcgctgtgagctgcttgcgagggagctgcggctgtcgctgggggtggaggag 1105
Query: 1017 tggaggaagacgccgggccagaagaggagggagagactcctgttacaggagctgctggcg 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 tggaggaagacgccgggccagaagaggagggagagactcctgttacaggagctgctggcg 1165
Query: 1077 gccgtcaacgagcgagacagactggtgcaggagatggacgaacaggagaaagcgatagct 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 gccgtcaacgagcgagacagactggtgcaggagatggacgaacaggagaaagcgatagct 1225
Query: 1137 caggacgacgagatagaaaggaacctgtccaccgtcgagattcagaggaagaacaattgc 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 caggacgacgagatagaaaggaacctgtccaccgtcgagattcagaggaagaacaattgc 1285
Query: 1197 atcctgcagtaagaggcgggcgccactctcgctcacgcgctcggcgttacgtttgcatcc 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 atcctgcagtaagaggcgggcgccactctcgctcacgcgctcggcgttacgtttgcatcc 1345
Query: 1257 ttcgttgatttcgattctcaaatgttttgctgttatatttagttaactgtccgcgtcct 1315
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 ttcgttgatttcgattctcaaatgttttgctgttatatttagttaactgtccgcgtcct 1404
Score = 176 bits (89), Expect = 8e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 55 agagcctgtcagaggacgagcgacaagcggtgctcagggaacgagccaggagactcatag 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agagcctgtcagaggacgagcgacaagcggtgctcagggaacgagccaggagactcatag 572
Query: 115 cggatgccaggaacggaggagggggacgg 143
|||||||||||||||||||||||||||||
Sbjct: 573 cggatgccaggaacggaggagggggacgg 601
Score = 143 bits (72), Expect = 1e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 276 ggaagggttcgccgtcgtctcccgccgtggagatcatctccaagcagtccgtcatggacg 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ggaagggttcgccgtcgtctcccgccgtggagatcatctccaagcagtccgtcatggacg 659
Query: 336 agttcgtggccg 347
||||||||||||
Sbjct: 660 agttcgtggccg 671
>BF01053B2F02
Length = 754
Score = 389 bits (196), Expect = e-107
Identities = 205/208 (98%)
Strand = Plus / Plus
Query: 733 ccggctcgtacctggcgagtgagctggaggcgctggagagagaacagcgggcggtggacg 792
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9 ccggctcgtacctggcgagtgagctggaggccctggagagagaacagcgggcggtggacg 68
Query: 793 agacggccgcgcggcttgaggtgcagctcaggaaggtcatggacaggggagacgacgcca 852
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 69 aaacggccgcgcggcttgaggtgcagctcaggaaggtcatggataggggagacgacgcca 128
Query: 853 gggaggaggaccgcctcatgtcgcagtggttcaacctggtgaacaagaagaacgcgctgc 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gggaggaggaccgcctcatgtcgcagtggttcaacctggtgaacaagaagaacgcgctgc 188
Query: 913 tgaggagacagatgcagcttaacatact 940
||||||||||||||||||||||||||||
Sbjct: 189 tgaggagacagatgcagcttaacatact 216
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 148,989
Number of extensions: 3000
Number of successful extensions: 3000
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2998
Number of HSP's successfully gapped: 4
Length of query: 1708
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1691
Effective length of database: 8,119,229
Effective search space: 13729616239
Effective search space used: 13729616239
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)