BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21999 (UTR included)
(4273 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2G03 1546 0.0
>BF01033B2G03
Length = 861
Score = 1546 bits (780), Expect = 0.0
Identities = 796/803 (99%)
Strand = Plus / Plus
Query: 3471 ccggagagacgttactcgccggagagtcgatactcgccggagaccgtccgctactcgccg 3530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccggagagacgttactcgccggagagtcgatactcgccggagaccgtccgctactcgccg 60
Query: 3531 gagagtcgttactcgccggaaagtcgctattcaccaccaagaagatcgccgtactcgcca 3590
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 gagagtcgttactcgccggaaagtcgctattcaccaccgagaagatcgccgtactcgcca 120
Query: 3591 cgaagacgacgttcaattgataggtacaacggccgcggctctcgcactagaaatggtccg 3650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaagacgacgttcaattgataggtacaacggccgcggctctcgcactagaaatggtccg 180
Query: 3651 gtcgatacagagacggaatatcactcggacagtcccacgagacgacctccgagacggcgg 3710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgatacagagacggaatatcactcggacagtcccacgagacgacctccgagacggcgg 240
Query: 3711 tactcaagacgtacctctggtccaagctctggttcagggtgttcttccgaatcggaaaaa 3770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactcaagacgtacctctggtccaagctctggttcagggtgttcttccgaatcggaaaaa 300
Query: 3771 tgatttgtgttctagtatttattttatttcggttgtagaaatatgacgaactgagccaaa 3830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgatttgtgttctagtatttattttatttcggttgtagaaatatgacgaactgagccaaa 360
Query: 3831 ttattcatcggtggttatggaaacttaatgtaagatattaatcgtctccactgggaattt 3890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttattcatcggtggttatggaaacttaatgtaagatattaatcgtctccactgggaattt 420
Query: 3891 ttaattaatttattagtcaataatatagagtaaaatatattttggctctcaaatggaatg 3950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttaattaatttattagtcaataatatagagtaaaatatattttggctctcaaatggaatg 480
Query: 3951 gtagtaaaaatcacaaaaatttactagctcctctttgctttttgcttccaactattatct 4010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtagtaaaaatcacaaaaatttactagctcctctttgctttttgcttccaactattatct 540
Query: 4011 tcctgaaaaatatatattaatcagtccgagacaaatataatacaatgttcccgataacca 4070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcctgaaaaatatatattaatcagtccgagacaaatataatacaatgttcccgataacca 600
Query: 4071 attttattcgactgtgtagattatgtaaatacttgtgtcatttgaattaaacattcattc 4130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attttattcgactgtgtagattatgtaaatacttgtgtcatttgaattaaacattcattc 660
Query: 4131 tagatgtttctatatttatttacttcagatttccctttcgctcggttagctttcacattg 4190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tagatgtttctatatttatttacttcagatttccctttcgctcggttagctttcacattg 720
Query: 4191 tcggacagtttcagactatgttctatattctgtggtcactttaataatcattattcagga 4250
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 721 tcggacagtttcagactatgttctatactctgtggtcactttaataatcattattcnnnn 780
Query: 4251 atatctcatacaataattttcat 4273
||||||||||||||||||||||
Sbjct: 781 ntatctcatacaataattttcat 803
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 463,968
Number of extensions: 8847
Number of successful extensions: 8847
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8838
Number of HSP's successfully gapped: 1
Length of query: 4273
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4255
Effective length of database: 8,109,745
Effective search space: 34506964975
Effective search space used: 34506964975
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)