BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22006 (UTR included)
(1369 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2601_C1 1419 0.0
>BF14_2601_C1
Length = 768
Score = 1419 bits (716), Expect = 0.0
Identities = 755/768 (98%)
Strand = Plus / Plus
Query: 318 ttaagaaacactttaaacatttttttgtcgttttctgaaaaccttactatatttcaataa 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaagaaacactttaaacatttttttgtcgttttctgaaaaccttactatatttcaataa 60
Query: 378 tttcttagttaataattgagtaaaccctaactttctccagtctgtaattcatgaaaaagc 437
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcttaattaataattgagtaaaccctaactttctccagtctgtaattcatgaaaaagc 120
Query: 438 agagaaaaggataaccataaatcagtttaaattattagtgttctttaataaaaggttata 497
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagaaaaggatagcaataaatcagtttaaattattagtgttctttaataaaaggttata 180
Query: 498 aagatggatactgtagttaagactattttggaagaggatcaggaagaagagggaaagggt 557
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 181 aagatggatactgtagttaagactattttagaagaggatcaggaagaagagggaaaggga 240
Query: 558 ttagtgatatttggacgagatgtctcaaaaataccgtgctttagagagagctttttatat 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttagtgatatttggacgagatgtctcaaaaataccgtgctttagagagagctttttatat 300
Query: 618 ggtgtctcatcaggtgttggtgtcggcttagcagcatttttgaagacttcaagacctctt 677
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtgtctcatcaggcgttggtgtcggcttagcagcatttttgaagacttcaagacctctt 360
Query: 678 ttctcccaacatgtgggaatggcaaccttcactgtgaccacgttactttattggtcctac 737
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 361 ttctcccaacatgtgggaatggcaacattcactgtgaccactttactttattggtcctac 420
Query: 738 tgcagatatgagtggtcgaagcaaaaatttgatgcccagctattgcaagaatcattaaag 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcagatatgagtggtcgaagcaaaaatttgatgcccagctattgcaagaatcattaaag 480
Query: 798 gacaaattgaagtatgaagggactgttgttgaaagggaactagaaaaacaaggtgtactc 857
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacaaattgaagtatgaagggaccgttgttgaaagggaactagaaaaacaaggtgtactc 540
Query: 858 aaaactgcctaattataatgttgcactgtagataatgagttggaaatgacaaaaatatac 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaactgcctaattataatgttgcactgtagataatgagttggaaatgacaaaaatatac 600
Query: 918 ttttttcggtattcaagccgaaaattcaacacagaaatattaaaaataattaattgatac 977
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttttttcagtattcaagccgaaaattcaacacagaaatattaaaaataattaattgatac 660
Query: 978 aaactattttgtaattttatcacagaagtaatcatcttatctcacctagtagtaaacttg 1037
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 661 aaactattttgtaattttatcacagaagtaatcatcttatctcacctagtagaaaacttg 720
Query: 1038 gttgcatttttgtctcataacaaaatgcaaaaataaagttcattgaag 1085
||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 721 gttacatttttgtcttataacaaaatgcaaaaataaagttcattgaag 768
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 219,653
Number of extensions: 5118
Number of successful extensions: 5118
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5118
Number of HSP's successfully gapped: 1
Length of query: 1369
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1352
Effective length of database: 8,119,229
Effective search space: 10977197608
Effective search space used: 10977197608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)