BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22007 (UTR included)
(5026 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3172_C1 1479 0.0
>BF14_3172_C1
Length = 907
Score = 1479 bits (746), Expect = 0.0
Identities = 773/782 (98%)
Strand = Plus / Plus
Query: 3529 gtatagtgccaacaaaatatggtatatcgtttcaaggcgatcttttgatgcaaggtggcg 3588
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtatagtgccaacaaaatatggtatatcgtttcaaggcgatcttttgatgcaaggtggtg 60
Query: 3589 ttctactattaatttataaggacggatctgttttactaactcttggaggtatcgaaatgg 3648
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttctactattaatttacaaggacggatcagttttactaactcttggaggtatcgaaatgg 120
Query: 3649 gtcaaggtctttttactaaaatgattcaagtcgcctcccgggctttagaagttgatgtcc 3708
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gtcaaggtctttttactaaaatgattcaagtcgcctcccggtctttagaagttgatgtct 180
Query: 3709 cgaaaatacacataagtgaaatggccacagacaaagtccctaacagttcaccaactgctg 3768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgaaaatacacataagtgaaatggccacagacaaagtccctaacagttcaccaactgctg 240
Query: 3769 caagtattagttccgacatatacggaatggcggtaataaacgcctgcaacactatcaatg 3828
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 caagtattagttccgacatatacggaatggcggtgataaacgcctgcaacactatcaatg 300
Query: 3829 acagattaaaaccaatcaaagcgaaaaaccctgaaggaagatgggaggagtggatctctc 3888
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 301 acagattaaaaccaatcaaagctaaaaaccctgaaggaagatgggaagagtggatctctc 360
Query: 3889 atgcgtattgccaaagaataagcttgtcagctgcaggcttctattctgcccctaaaattg 3948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgcgtattgccaaagaataagcttgtcagctgcaggcttctattctgcccctaaaattg 420
Query: 3949 attacgatcgggaaaaaaattcagggaatctctatgaatatttcacttatggagttgctt 4008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attacgatcgggaaaaaaattcagggaatctctatgaatatttcacttatggagttgctt 480
Query: 4009 gttcggaggttatcatcgattgcctcactggagatcaccaggtactgagaactgatatag 4068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttcggaggttatcatcgattgcctcactggagatcaccaggtactgagaactgatatag 540
Query: 4069 ttatggatgttggggaaagtttaaatccagcgatagatattggacagatcgagggcgctt 4128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttatggatgttggggaaagtttaaatccagcgatagatattggacagatcgagggcgctt 600
Query: 4129 tcatacagggatacggttactacacgttagaagaaatgttgttctccccaaccggagaag 4188
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 601 tcatacagggatacggttactacacattagaagaaatgttgttctccccaaccggagaag 660
Query: 4189 tattaactaagggaccaggtgcttataagattccaggattctctgatatcccgaaagaat 4248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tattaactaagggaccaggtgcttataagattccaggattctctgatatcccgaaagaat 720
Query: 4249 ttaacgtagccttactgaaaggggcgcccaatgcacgtgctgtttattcttctaaggcta 4308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttaacgtagccttactgaaaggggcgcccaatgcacgtgctgtttattcttctaaggcta 780
Query: 4309 ta 4310
||
Sbjct: 781 ta 782
Score = 99.6 bits (50), Expect = 4e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 4303 aggctataggggagcctcctctgttcctcgcagcatcagtattcttcgct 4352
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 aggctataggggagcctcctctgttcctcgcagcatcagtattcttcgct 895
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 632,518
Number of extensions: 12747
Number of successful extensions: 12747
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12747
Number of HSP's successfully gapped: 2
Length of query: 5026
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5008
Effective length of database: 8,109,745
Effective search space: 40613602960
Effective search space used: 40613602960
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)