BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22008 (UTR included)
(5068 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1G05 1465 0.0
>BF01049A1G05
Length = 779
Score = 1465 bits (739), Expect = 0.0
Identities = 769/779 (98%)
Strand = Plus / Plus
Query: 3268 ccggctacgtatgcaagacgaatctgccatcaaacacagcatttcgaggattcggtggtc 3327
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ccggctacgtatgcaagacgaatctgccatcaaacactgcatttcgaggattcggtggtc 60
Query: 3328 ctcagggaatgtttggcgctgaaaatatgatttgggatattgcagccaaattaaacaaaa 3387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcagggaatgtttggcgctgaaaatatgatttgggatattgcagccaaattaaacaaaa 120
Query: 3388 gtcaagacgaaattaggcggattaacttgtatactgagaactcaattacacattatggtc 3447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcaagacgaaattaggcggattaacttgtatactgagaactcaattacacattatggtc 180
Query: 3448 aagtgctaactcattgtactttacaaagatgttgggatgaatgtgtagagaaaagcaata 3507
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtgctaactcattgtactttacaaagatgttgggatgaatgtgtagagaaaagcaatt 240
Query: 3508 tatcacaaagaagaaaagatattgaagaatttaataaacaaaaccgttggcggaagagag 3567
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatcacaaagaagaaaatatattgaagaatttaataaacaaaaccgttggcggaagagag 300
Query: 3568 gcatctctataattccaactaaatttggaattgcattcactgagaagttattgaatcagg 3627
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 301 gcatctctataattccaactaaatttggaattgcattcacggagaagctattgaatcagg 360
Query: 3628 ctggtgctttattattggtttatacagatggctccgtactcttatcccacgggggcacag 3687
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctggtgctttgttattggtttatacagatggctccgtactcttatcccacgggggcacag 420
Query: 3688 aaatgggacaaggactccatacgaaaatgatacagattgtatcccgtgctttaggaatag 3747
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaatgggacaaggactccatacaaaaatgatacagattgtatcccgtgctttaggaatag 480
Query: 3748 atatttcaaagattcatataagtgaaacagctactgataaagtccccaatacatcagcga 3807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atatttcaaagattcatataagtgaaacagctactgataaagtccccaatacatcagcga 540
Query: 3808 cagctgcgagtgccggttcagatctgaatggtatggctgttctggaggcatgtcagacac 3867
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 cagctgcgagtgccggttcagatctgaatggtatggctgttttggaggcatgtcagacac 600
Query: 3868 taacgaagcgtctccagccttacaaggataaaattccaaatggaaaatgggaagactggg 3927
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taacgaagtgtctacagccttacaaggataaaattccaaatggaaaatgggaagactggg 660
Query: 3928 tatcggcggcttatgtagaccgggtaagcttagctgctacaggattctacgctactccgg 3987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatcggcggcttatgtagaccgggtaagcttagctgctacaggattctacgctactccgg 720
Query: 3988 atattggtttcgactttaagaacaacaaaggaaaacctttcaattactttacatttggg 4046
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atattggtttcgactttaagaacaacaaaggaaaacctttcaattactttacatttggg 779
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 621,937
Number of extensions: 13039
Number of successful extensions: 13039
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13039
Number of HSP's successfully gapped: 1
Length of query: 5068
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5050
Effective length of database: 8,109,745
Effective search space: 40954212250
Effective search space used: 40954212250
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)