BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22015 (UTR included)
(1807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01002X1F12 1366 0.0
>BF01002X1F12
Length = 707
Score = 1366 bits (689), Expect = 0.0
Identities = 692/693 (99%)
Strand = Plus / Plus
Query: 483 ctaaaattcattaaagaaatggcttctgtaaaggacgttgcaactctttatcaaaatctt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 ctaaaattcattaaagaaatggcttctgtaaaggacgttgcaactctttatcaaaatctt 74
Query: 543 aaaacagaatgggcgaaaaaaccacgcaagttagacaaatgtggcgagcttctcaataaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aaaacagaatgggcgaaaaaaccacgcaagttagacaaatgtggcgagcttctcaataaa 134
Query: 603 ataaagattgcactaacccatcttagtttcttacctagtaataatgaagccgctaaccaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ataaagattgcactaacccatcttagtttcttacctagtaataatgaagccgctaaccaa 194
Query: 663 aaagaattgatattaggtcgcgatgttttggaaatcggagcacaatgggctgtagcgact 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaagaattgatattaggtcgcgatgttttggaaatcggagcacaatgggctgtagcgact 254
Query: 723 aaagacgtaaaggcatttgaaagatatatgtctcaattaaaatgttactactttgattac 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaagacgtaaaggcatttgaaagatatatgtctcaattaaaatgttactactttgattac 314
Query: 783 aaagatcaccttccggagtcagccttcacttaccaactgttgggtttaaatcttttgttt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaagatcaccttccggagtcagccttcacttaccaactgttgggtttaaatcttttgttt 374
Query: 843 ttgctggctcagaatagagttgctgaattccacactgaactcgagcgtctccctgttgat 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttgctggctcagaatagagttgctgaattccacactgaactcgagcgtctccctgttgat 434
Query: 903 gtgatcagagcggatccttatgtcaagcatccattggctttggaacagtatctgatggaa 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtgatcagagcggatccttatgtcaagcatccattggctttggaacagtatctgatggaa 494
Query: 963 ggaagctataataaaattttcttggctaaggataatgtaccagcagagagttacacattg 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggaagctataataaaattttcttggctaaggataatgtaccagcagagagttacacattg 554
Query: 1023 tttatggacactttactagatactgtgagaggtgaaatagcagcttgtattgaaaaggct 1082
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 555 tttatggacactttactagataccgtgagaggtgaaatagcagcttgtattgaaaaggct 614
Query: 1083 tacttgtgtatatcaagcactgaagctgccagaaggcttaacttacctaatcagcaggca 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tacttgtgtatatcaagcactgaagctgccagaaggcttaacttacctaatcagcaggca 674
Query: 1143 gttttggaatatggaaagaagcgtaactggaca 1175
|||||||||||||||||||||||||||||||||
Sbjct: 675 gttttggaatatggaaagaagcgtaactggaca 707
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,945
Number of extensions: 5719
Number of successful extensions: 5719
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5719
Number of HSP's successfully gapped: 1
Length of query: 1807
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1790
Effective length of database: 8,119,229
Effective search space: 14533419910
Effective search space used: 14533419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)