BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22024 (UTR included)
(1501 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B2B03 1090 0.0
>BF01017B2B03
Length = 624
Score = 1090 bits (550), Expect = 0.0
Identities = 550/550 (100%)
Strand = Plus / Plus
Query: 526 cagggcgcgttgccctggtggctgatgggcccctgaagggaaaactagtgagcgtggttg 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 cagggcgcgttgccctggtggctgatgggcccctgaagggaaaactagtgagcgtggttg 111
Query: 586 atgtcattgaccaaacacgagcactcgttgatggacctggtagcggagtatcgcgacagc 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atgtcattgaccaaacacgagcactcgttgatggacctggtagcggagtatcgcgacagc 171
Query: 646 aaatacgcctgaaccagcttcatcttactaaattccgcctgaagtatccctttactgccc 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aaatacgcctgaaccagcttcatcttactaaattccgcctgaagtatccctttactgccc 231
Query: 706 ccacacgtgttgtcaggaaggcttggtcagacgccaagcttaacgaaaaatgggctgaca 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ccacacgtgttgtcaggaaggcttggtcagacgccaagcttaacgaaaaatgggctgaca 291
Query: 766 gtcagtgggctaagaatttggcaaataaagagaagcgtgctcaaatgaccgactacgaca 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtcagtgggctaagaatttggcaaataaagagaagcgtgctcaaatgaccgactacgaca 351
Query: 826 gatttaagttgagctccgcccgcgttaagagaaaccgtgcaagaacagcagtcttcaaga 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gatttaagttgagctccgcccgcgttaagagaaaccgtgcaagaacagcagtcttcaaga 411
Query: 886 gcttgaaagtgaaagcagcgcggagcggtgtctttggcaagaagaaggttcccaagaccc 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gcttgaaagtgaaagcagcgcggagcggtgtctttggcaagaagaaggttcccaagaccc 471
Query: 946 cagccaagaagatccgcacgaaaaaggcgccttctgctaaaccagcaaagaagtaattct 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cagccaagaagatccgcacgaaaaaggcgccttctgctaaaccagcaaagaagtaattct 531
Query: 1006 tgttttgtgcctgaagcaacataagtgtaatttataggacaaatcaaaataaagaattac 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgttttgtgcctgaagcaacataagtgtaatttataggacaaatcaaaataaagaattac 591
Query: 1066 tttaagctaa 1075
||||||||||
Sbjct: 592 tttaagctaa 601
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,221
Number of extensions: 4504
Number of successful extensions: 4504
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4504
Number of HSP's successfully gapped: 1
Length of query: 1501
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1484
Effective length of database: 8,119,229
Effective search space: 12048935836
Effective search space used: 12048935836
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)