BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22027 (UTR included)
(5728 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1E04 398 e-110
BF01022A2B02 383 e-105
>BF01011B1E04
Length = 745
Score = 398 bits (201), Expect = e-110
Identities = 207/209 (99%)
Strand = Plus / Minus
Query: 3276 ggtgactggaaaagtgccatccagatgtatcacacgagtggtcagtgggagaacgctgag 3335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggtgactggaaaagtgccatccagatgtatcacacgagtggtcagtgggagaacgctgag 267
Query: 3336 cgcgtggctcgggctcacgctccggttggagtacagcagcaggtggctcttcagtgggcc 3395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cgcgtggctcgggctcacgctccggttggagtacagcagcaggtggctcttcagtgggcc 207
Query: 3396 gggtcgttgtccgcagcagccgcggcccgcctgttggttgcccggggactggcagcactt 3455
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 206 gggtcgttgtccgcggcagccgcggcccgcctgttggttgcccgcggactggcagcactt 147
Query: 3456 ggggcgcggtgggccctacaggcgcacag 3484
|||||||||||||||||||||||||||||
Sbjct: 146 ggggcgcggtgggccctacaggcgcacag 118
Score = 99.6 bits (50), Expect = 5e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 3229 gcgccgcgggggaccttcgggccgctgagacctactacatacaagctggt 3278
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gcgccgcgggggaccttcgggccgctgagacctactacatacaagctggt 696
>BF01022A2B02
Length = 784
Score = 383 bits (193), Expect = e-105
Identities = 205/209 (98%)
Strand = Plus / Minus
Query: 3276 ggtgactggaaaagtgccatccagatgtatcacacgagtggtcagtgggagaacgctgag 3335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggtgactggaaaagtgccatccagatgtatcacacgagtggtcagtgggagaacgctgag 303
Query: 3336 cgcgtggctcgggctcacgctccggttggagtacagcagcaggtggctcttcagtgggcc 3395
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgcgtggcccgggctcacgctccggttggagtacagcagcaggtggctcttcagtgggcc 243
Query: 3396 gggtcgttgtccgcagcagccgcggcccgcctgttggttgcccggggactggcagcactt 3455
|||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 242 gggtcgttgtccgcggcaaccgcggcccgcctgctggttgcccggggactggcagcactt 183
Query: 3456 ggggcgcggtgggccctacaggcgcacag 3484
|||||||||||||||||||||||||||||
Sbjct: 182 ggggcgcggtgggccctacaggcgcacag 154
Score = 103 bits (52), Expect = 3e-21
Identities = 52/52 (100%)
Strand = Plus / Minus
Query: 3227 ccgcgccgcgggggaccttcgggccgctgagacctactacatacaagctggt 3278
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ccgcgccgcgggggaccttcgggccgctgagacctactacatacaagctggt 712
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 563,953
Number of extensions: 10407
Number of successful extensions: 10407
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10407
Number of HSP's successfully gapped: 4
Length of query: 5728
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5710
Effective length of database: 8,109,745
Effective search space: 46306643950
Effective search space used: 46306643950
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)