BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22042 (UTR included)
(2263 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028A1H04 1322 0.0
>BF01028A1H04
Length = 713
Score = 1322 bits (667), Expect = 0.0
Identities = 701/713 (98%)
Strand = Plus / Plus
Query: 865 aatccacattaacgaagatactccttaattatgcggtgcggatgggtcgacgacctatat 924
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatccacattaacgaagatactccttaattatgcggtnnggatgggtcgacgacctatat 60
Query: 925 ttgtagacctggatgttggccaaggacatataagtgttccaggaactattggtgcattat 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtagacctggatgttggccaaggacatataagtgttccaggaactattggtgcattat 120
Query: 985 tagttgagcgtccagcctctatagaagagggttttagtcagcaagcgccgctagtgtacc 1044
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 121 tagttgagcgtccagcctctatagaagagggtttcagccagcaagcgccgctagtgtacc 180
Query: 1045 actttggtcacaaatcacccggcgacaacttggagctatacaacatgattgtgtcacgtc 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actttggtcacaaatcacccggcgacaacttggagctatacaacatgattgtgtcacgtc 240
Query: 1105 tggctgaagttatcgctgagagatgtgaaaataataagaaagcatcaacgtcaggagtga 1164
||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 241 tggctgaagttatcgctgagagatgtgaaaataataagaaagcgtcgatgtcaggagtga 300
Query: 1165 tcatcaatacatgtggatgggtgaagggaacagggtacaaagtactgacacatgctgccc 1224
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 tcatcaatacatgtggatgggtgaagggaacagggtacaaagtactgactcatgctgccc 360
Query: 1225 aggcttttgaggtcgatgttatattggtgttggacaacgagcgtctctacaatgaactga 1284
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggctttcgaggttgatgttatattggtgttggacaacgagcgtctctacaatgaactga 420
Query: 1285 agagggacatgccgaagtttgtgaaagttgtttatttaccaaaaagtggaggggtagttg 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagggacatgccgaagtttgtgaaagttgtttatttaccaaaaagtggaggggtagttg 480
Query: 1345 aacgttcctccacacaacgagctgaggcccgagacgctcgtataagggaatacttctatg 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacgttcctccacacaacgagctgaggcccgagacgctcgtataagggaatacttctatg 540
Query: 1405 gaaatcggacaccatactacccacattcatttgatgttaagttctcagaccttaagatct 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaaatcggacaccatactacccacattcatttgatgttaagttctcagaccttaagatct 600
Query: 1465 acaaggtgggcgccccctctctgccagactcttgtatgcctctgggtatgcgttcgtctg 1524
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 601 acaaggtgggcgccccctctctgccagactcgtgtatgcctctgggtatgcgttcgtctg 660
Query: 1525 atgctctgacccgcctggtgccggcctggccgtctccgtctctggcgcaccgg 1577
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgccctgacccgcctggtgccggcctggccgtctccgtctctggcgcaccgg 713
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,148
Number of extensions: 6393
Number of successful extensions: 6393
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6393
Number of HSP's successfully gapped: 1
Length of query: 2263
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2246
Effective length of database: 8,119,229
Effective search space: 18235788334
Effective search space used: 18235788334
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)