BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22044 (UTR included)
(8041 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01036X1C04 1435 0.0
>BF01036X1C04
Length = 793
Score = 1435 bits (724), Expect = 0.0
Identities = 774/793 (97%)
Strand = Plus / Plus
Query: 4896 tttgctgatttcgttaaagtggctgatatggaaatcgaaaaagatatgatgaattttgac 4955
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgctgatttcgtaaaagtggctgatatggaaatcgaaaaagatatgatgaattttgac 60
Query: 4956 gacttgcctgcaccacgtaataatggtgataacaatgaaaatggcgaaatgtttatcgat 5015
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 gacttgcctgcaccacgtaataatgatgataacaatgaaaatggcgaaatgtttatcgat 120
Query: 5016 gccgaggcatttgagtttctgcttaatcaaaataagagtaatatggtcgcggatagcggt 5075
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gccgaggcatttgagtttctgcttaatcaaaataagagtaatacggtcgcggatagcggt 180
Query: 5076 aaagaaagtctctttcttaagtttgatccactgtttgcaaaacgagtttcctctgacgga 5135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagaaagtctctttcttaagtttgatccactgtttgcaaaacgagtttcctctgacgga 240
Query: 5136 gtagttgctgctctgaacaaaattaaaaacagacaaagcactccgaagaaaccaactccg 5195
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtagttgccgctctgaacaaaattaaaaacagacaaagcactccgaagaaaccaactccg 300
Query: 5196 ttaaagccaattatgcaagaagacagcctttcaccagaacattcaactatcacagtaagt 5255
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgaagccaattatgcaagaagacagcctttcaccagaacattcaactatcacagtaagt 360
Query: 5256 acagctccagtgaccggtggggcggtcgatgaccctgtcgcaacgacattcaaaccaatg 5315
|| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acggctccagggaccgttggggcggtcgatgaccctgtcgcaacgacattcaaaccaatg 420
Query: 5316 atggtggtgaatccggcagtggcttccatggtttcgcctagaaaatgtacaactccgccg 5375
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 421 atggtggtgaatccggcagtggcttccatggtttcgcctagaaaatctacaactccgccg 480
Query: 5376 agagctaatagacgttctctaaatattacgtctcctgctatggctgttattgacagactc 5435
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 agagctaatagacgttctctaaatattacgtctcctgctatggctgttattgatagactc 540
Query: 5436 ttatctctaagcggaaactcttcgcgattagaagaagctagttctgtacctctgcccaga 5495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttatctctaagcggaaactcttcgcgattagaagaagctagttctgtacctctgcccaga 600
Query: 5496 cactacagtgagacagattttgccctgacccaactcagggaactattggcagagaaagaa 5555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cactacagtgagacagattttgccctgacccaactcagggaactattggcagagaaagaa 660
Query: 5556 ataaacgtacataatttaaggttagagtccaaggaattaaaagaaagattagcaaacatg 5615
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 661 ataaacgtacataatttaaggttagagtccaaggaattaaaagaaagattagcnnncatg 720
Query: 5616 gaaactcaagtgcacagtttagaaaatgagagcaaagaaagattgaggaaagtgaacgag 5675
||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 721 gaaactcaagtacaaagtttagnnnntgagagcaaagaaagattgaggaaagtgaacgag 780
Query: 5676 ctcaacgaaagac 5688
|||||||||||||
Sbjct: 781 ctcaacgaaagac 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 143,279
Number of extensions: 16979
Number of successful extensions: 16979
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 16979
Number of HSP's successfully gapped: 1
Length of query: 8041
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8023
Effective length of database: 8,109,745
Effective search space: 65064484135
Effective search space used: 65064484135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)