BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22070 (UTR included)
(1177 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 214 2e-55
BF01019B1G10 111 3e-24
BF01012A1B09 78 4e-14
BF01044B2E12 76 1e-13
>BF14_729_C3
Length = 2041
Score = 214 bits (108), Expect = 2e-55
Identities = 246/290 (84%), Gaps = 10/290 (3%)
Strand = Plus / Plus
Query: 520 agagaagatggctggaatctattcaacatctgggacaccctcct-aaaaatataaaatcc 578
|||||||||||||||||||||| |||| ||||||| || | || |||||||||||||||
Sbjct: 1392 agagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatcc 1451
Query: 579 cataaaagtgaccacaccgcaggacctcatgataccgtaagcgccttctgccggcatcca 638
||| | ||||||||||||||||||| || ||||| ||||| |||||||||||||||
Sbjct: 1452 catgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatcca 1511
Query: 639 gagcggtacgccagacaattaagaaatcgatggtcgtagacgataaataa-taggaccaa 697
||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||
Sbjct: 1512 gagcggtacgccannnnattaagaaatcgatggcggtagatgataaataacaaggaccaa 1571
Query: 698 ccaacagacattcacatctcgtctgcccgtgatcactttt------cagcaaccgaaact 751
| ||||||||||||| ||||||||||||||||||| || || |||||||||
Sbjct: 1572 ctgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacg 1631
Query: 752 tcgggattatgtagtttttaaaaataataaaattcgcgtagtaaatccga 801
||||||||||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 1632 tcgggattatgtagttttt--aaataataaaatccgcgtagtatatccga 1679
>BF01019B1G10
Length = 488
Score = 111 bits (56), Expect = 3e-24
Identities = 75/80 (93%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 742 aaccgaaacttcgggattatgtagtttttaaaaataataaaattcgcgtagtaaatccga 801
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 369 aaccgaaacgtcgggattatgtagtttttaaaa-taataaaattcgcgtagtaaatgcga 311
Query: 802 taaatattagttttatttta 821
|||||||| ||||||||||
Sbjct: 310 aaaatattacttttatttta 291
>BF01012A1B09
Length = 841
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 742 aaccgaaacttcgggattatgtagtttttaaaaataataaaattcgcgtagtaaatccga 801
||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 815 aaccgaaacgtcgggattatgtagtttt--aaaataataaaatccgcgtagtgtatccga 758
Query: 802 taaatattagttttattt 819
| |||||||||| ||||
Sbjct: 757 aatatattagtttcattt 740
>BF01044B2E12
Length = 823
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 742 aaccgaaacttcgggattatgtagtttttaaaaataataaaattcgcgtagtaaatccga 801
||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 5 aaccgaaacgtcgggattatgtagnnntt--aaataataaaatccgcgtagtaaatccga 62
Query: 802 taaatattagttttattt 819
||||| |||||| ||||
Sbjct: 63 aaaatactagtttcattt 80
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 171,326
Number of extensions: 3880
Number of successful extensions: 3880
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3876
Number of HSP's successfully gapped: 5
Length of query: 1177
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1160
Effective length of database: 8,119,229
Effective search space: 9418305640
Effective search space used: 9418305640
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)