BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22074 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 101 4e-21
BF01019A1H08 92 4e-18
BF01049B1F01 86 2e-16
BF01016A2B02 82 4e-15
BF01031B2E06 78 6e-14
BF14_335_C4 78 6e-14
BF14_335_C5 72 4e-12
BF01045B1A06 68 6e-11
>BF14_335_C2
Length = 1827
Score = 101 bits (51), Expect = 4e-21
Identities = 130/153 (84%), Gaps = 5/153 (3%)
Strand = Plus / Minus
Query: 365 gagagctataactgctaaatctctccacaaaatactaaaagacttgggcctatccagaat 424
||||| |||||| |||||||||||| ||| |||||||| |||||||||| |||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 425 taaaatcagttcattcttggaacgtacttaaaaggcagc-ccagtaggctccgtttcaaa 483
||| | |||||||||||| |||||||||| ||| |||| | |||||| | |||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtagg-ttcgtttcaaa 989
Query: 484 tttggttaggtagagagatgagcttggacggtg 516
||||||||| |||||| ||||||||||||||
Sbjct: 988 tttggttag---gagagaggagcttggacggtg 959
Score = 87.7 bits (44), Expect = 6e-17
Identities = 75/84 (89%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 1336 tacgcgcgttagataggggtcccttggacctgcagctgagtcgcaagtcccaggcactgt 1395
|||||| |||||||||||| | ||| |||| || ||| ||||||| |||||||||||||
Sbjct: 943 tacgcgagttagatagggg-ctcttaaacctacacctgtgtcgcaaatcccaggcactgt 885
Query: 1396 tgaagctcctctccctgcaacgcg 1419
||||||||||||||||||||||||
Sbjct: 884 tgaagctcctctccctgcaacgcg 861
>BF01019A1H08
Length = 504
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 1344 ttagataggggtcccttggacctgcagctgagtcgcaagtcccaggcactgttgaagctc 1403
||||||||| | ||||| |||| || ||| ||||||| |||||||||||||||||||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 1404 ctctccctgcaacgcgat 1421
||||||||||||||||||
Sbjct: 432 ctctccctgcaacgcgat 415
>BF01049B1F01
Length = 840
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 1375 gtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 1417
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
>BF01016A2B02
Length = 780
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1371 ctgagtcgcaagtcccaggcactgttgaagctcctctccctgcaacgcg 1419
||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 270 ctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacgcg 222
>BF01031B2E06
Length = 707
Score = 77.8 bits (39), Expect = 6e-14
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 324 aataggttcgtcgtaaatttgtacgtggtagaagatggagcgagagctataactgctaaa 383
||||||||||| | ||||||||||| |||||||| |||||||| | | ||| ||||||
Sbjct: 497 aataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaa 556
Query: 384 tctctccacaaaatactaaaagacttgggcctatccaga 422
||||||||||| |||||||| ||||||||| ||||||
Sbjct: 557 tctctccacaacctactaaaaaccttgggcctgtccaga 595
>BF14_335_C4
Length = 1491
Score = 77.8 bits (39), Expect = 6e-14
Identities = 46/47 (97%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 1375 gtcgcaagtcccaggcactgttgaagctcctctccctgcaacgcgat 1421
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1268 gtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgcgat 1313
>BF14_335_C5
Length = 1597
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1376 tcgcaagtcccaggcactgttgaagctcctctccctgcaa 1415
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 1517 tcgcaagtcccaggcactgttgaagctcctctccgtgcaa 1556
>BF01045B1A06
Length = 820
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 1379 caagtcccaggcactgttgaagctcctctccctgcaac 1416
||||||| ||||||||||||||||||||||||||||||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaac 711
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,213
Number of extensions: 3083
Number of successful extensions: 3083
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 3079
Number of HSP's successfully gapped: 9
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)