BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22084 (UTR included)
(1473 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1B12 1094 0.0
BF01037B2B11 293 4e-79
BF01014B2D12 80 1e-14
>BF01039A1B12
Length = 672
Score = 1094 bits (552), Expect = 0.0
Identities = 647/683 (94%), Gaps = 18/683 (2%)
Strand = Plus / Plus
Query: 734 aggccttgacggacggcgctgcgggccgcgcgcgggccgaggaggtcagcggcgagcaca 793
||||||||||||||||||| |||| ||||| |||||||||||||||||| | ||||||||
Sbjct: 1 aggccttgacggacggcgccgcggaccgcgtgcgggccgaggaggtcagtgacgagcaca 60
Query: 794 cggagcagaggaccgcggacggagacacgcactacaagcctcctctccctccgggcgccg 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggagcagaggaccgcggacggagacacgcactacaagcctcctctccctccgggcgccg 120
Query: 854 tccgccgctggtgtgccggcgtgctggtggcgctgcacggcctacacgcacagggggtcg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccgccgctggtgtgccggcgtgctggtggcgctgcacggcctacacgcacagggggtcg 180
Query: 914 tgtgcagtagtggtgacgtcaccagggacctatgcccgtccaacgtgttgctgtcccagg 973
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgcag------------------ggacctatgcccgtccaacgtgttgctgtcccagg 222
Query: 974 gcgggcgcgtgtcgctcacctacttccccggctacgactccgctaccttccaatccaagc 1033
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 223 gcgggcgcgtgtcgctcacctacttccccggctacgactccgctactttccaatccaaac 282
Query: 1034 tgcactccgtcccgcggaacctctcgctgtacctggcgcccgagctcacctcccggatcc 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgcactccgtcccgcggaacctctcgctgtacctggcgcccgagctcacctcccggatcc 342
Query: 1094 cgtgtgacgatagccatctctgtgactactggagcttgggagccatcatgtattacctca 1153
|||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 343 cgtgtgacgacagccacctctgtgactactggagcctgggagccatcatgtattacctca 402
Query: 1154 tatgtggattccctctgtcaagtcatcacagcacattcacgagtcacaccatattgtact 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 403 tatgtggattccctctgtcaagtcatcacagcacattcacgagtcacaccatactgtact 462
Query: 1214 tgccggaggagctgagtgttgaagaagagtcgatacttacacagctactaacttacgagc 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgccggaggagctgagtgttgaagaagagtcgatacttacacagctactaacttacgagc 522
Query: 1274 cctccgagaggttgggttccggagaaaccgggattgaagaaattaaacaacatccatact 1333
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 523 cctccgagaggttgggttccggagaaaccgggatagaagaaattaaacaacatccatact 582
Query: 1334 tcaagaatattgactgggaggagttttacacaacaatgtaacaataaaaatatatatgtg 1393
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 583 tcaagaatattgactgggaggagttttacactacaatataacaataaaaatatatgtgtg 642
Query: 1394 tgtgtgtgtgtgtgcgtgtgtgt 1416
| || ||||||||| ||||||||
Sbjct: 643 tatgggtgtgtgtgtgtgtgtgt 665
>BF01037B2B11
Length = 784
Score = 293 bits (148), Expect = 4e-79
Identities = 154/156 (98%)
Strand = Plus / Plus
Query: 310 aaggtcatacaaaaaataccaaacaatctgacagagttcgacgattacttccaacgtgga 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aaggtcatacaaaaaataccaaacaatctgacagagttcgacgattacttccaacgtgga 688
Query: 370 gacgagaccaggcagatcatactgccgacggctgtaccgtgtgtgatgcaactgcactcc 429
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 689 gacgagaccaggcagatcatactgccgacggctgtgccgtgtgtgatgcaactgcactcc 748
Query: 430 tacatagagaccagcgatatgatattcctcatactc 465
|||||||||||| |||||||||||||||||||||||
Sbjct: 749 tacatagagaccggcgatatgatattcctcatactc 784
Score = 204 bits (103), Expect = 3e-52
Identities = 106/107 (99%)
Strand = Plus / Plus
Query: 206 cggatcctgattctcagcggaggactctcattaaagagaagactcacaagtatctgacgc 265
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 384 cggatcctgattctcagcggaggactctcattaaggagaagactcacaagtatctgacgc 443
Query: 266 acgctgaagacatctacaacaaacacctcagtgagctggagcacaag 312
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acgctgaagacatctacaacaaacacctcagtgagctggagcacaag 490
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 160 catattatttaatttcccataattcccagaaatatgtttataaaac 205
|||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 catattatttaatttcccataattcccagaaatatgttcataaaac 46
>BF01014B2D12
Length = 734
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 148 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 89
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 150 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 91
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 152 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 93
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 154 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 95
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 156 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 97
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgt 1448
|||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 146 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 88
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 1391 gtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 157 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 99
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| |||||||||||| ||||| ||||| |||||
Sbjct: 128 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtg 69
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| |||| ||||| |||||
Sbjct: 130 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtg 71
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| || || ||||| |||||
Sbjct: 132 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtg 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||||||||||||||||| ||||||||| ||||||||||||| |||| ||||| |||||
Sbjct: 134 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtg 75
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgtg 1449
|||| ||||||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 162 tgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 103
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 1390 tgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgcgtgtgagtgtgagtgt 1448
|||||||||||||||||| ||||||||| |||||||||| || ||||| ||||| ||||
Sbjct: 126 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgt 68
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 156,949
Number of extensions: 4609
Number of successful extensions: 4609
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4589
Number of HSP's successfully gapped: 18
Length of query: 1473
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1456
Effective length of database: 8,119,229
Effective search space: 11821597424
Effective search space used: 11821597424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)