BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22086 (UTR included)
(1705 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011A2F05 299 8e-81
BF01048B1C12 274 4e-73
>BF01011A2F05
Length = 684
Score = 299 bits (151), Expect = 8e-81
Identities = 157/159 (98%)
Strand = Plus / Plus
Query: 479 attactatttgctgtaatagcaatggaggcacagaatataaatagttttgctatatcttt 538
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 79 attactatttgctctaatagcaatggaggcacagaatataaatagttttgctatttcttt 138
Query: 539 tagaaacaacaaactaagctattgcggtcaggattgtcaaaggataccgccctcgttatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tagaaacaacaaactaagctattgcggtcaggattgtcaaaggataccgccctcgttatg 198
Query: 599 gaacatgtatggggcaaaagtaaattacctagatttaag 637
|||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gaacatgtatggggcaaaagtaaattacctagatttaag 237
>BF01048B1C12
Length = 789
Score = 274 bits (138), Expect = 4e-73
Identities = 141/142 (99%)
Strand = Plus / Plus
Query: 781 taacagacttggatggtttaataaataagatatgcgagaactttccctcgctgtcgtact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 taacagacttggatggtttaataaataagatatgcgagaactttccctcgctgtcatact 60
Query: 841 tgagtttgctgagtaataaggcatgtcccaaccagctgtcggatcaagagaaagatgaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagtttgctgagtaataaggcatgtcccaaccagctgtcggatcaagagaaagatgaca 120
Query: 901 cagattatcagagatacaggta 922
||||||||||||||||||||||
Sbjct: 121 cagattatcagagatacaggta 142
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,439
Number of extensions: 4939
Number of successful extensions: 4939
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4939
Number of HSP's successfully gapped: 2
Length of query: 1705
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1688
Effective length of database: 8,119,229
Effective search space: 13705258552
Effective search space used: 13705258552
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)