BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22092 (UTR included)
(1363 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A2F10 96 2e-19
BF01025A1H05 88 4e-17
BF14_1341_C1 82 3e-15
BF01038A2H08 78 4e-14
BF01020B1G03 70 1e-11
>BF01021A2F10
Length = 792
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 112 tttttttttgttaatgtttttacggctctggatacgagtccttttgagcctg 163
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 tttttttttgtaaatgtttttacggctctggatacgagtccttttgagcctg 98
>BF01025A1H05
Length = 756
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 111 ttttttttttgttaatgtttttacggctctggatacgagtccttttgagcct 162
|||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 245 ttttttttttgtaaatgtttttagggctctggatacgagtccttttgagcct 296
>BF14_1341_C1
Length = 1009
Score = 81.8 bits (41), Expect = 3e-15
Identities = 51/53 (96%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 111 ttttttttttgttaatgttttt-acggctctggatacgagtccttttgagcct 162
|||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 995 ttttttttttgtaaatgttttttacggctctggatacgagtccttttgagcct 943
>BF01038A2H08
Length = 781
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 113 ttttttttgttaatgtttttacggctctggatacgagtccttttgag 159
|||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 479 ttttttttgtaaatatttttacggctctggatacgagtccttttgag 525
>BF01020B1G03
Length = 748
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 109 ttttttttttttgttaatgtttttacggctctggatacgagtccttttgag 159
||||||||||||| ||| || |||||| |||||||||||||||||||||||
Sbjct: 429 ttttttttttttggtaacgtctttacgactctggatacgagtccttttgag 479
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,257
Number of extensions: 18726
Number of successful extensions: 18726
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 18725
Number of HSP's successfully gapped: 5
Length of query: 1363
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1346
Effective length of database: 8,119,229
Effective search space: 10928482234
Effective search space used: 10928482234
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)