BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22107 (UTR included)
(2350 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B1F04 1417 0.0
>BF01062B1F04
Length = 752
Score = 1417 bits (715), Expect = 0.0
Identities = 742/752 (98%)
Strand = Plus / Plus
Query: 579 atatcaaaacaaagagtatgcattattggcgccgggctagccgggctgacatctgggaaa 638
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 atatcaaaacaaagagtatgcattattggcgcccnnntagccgggctgacatctgggaaa 60
Query: 639 tacctgcaggatgaaggcatcaattttatcatactagaagctacgaaatacttcggcggg 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacctgcaggatgaaggcatcaattttatcatactagaagctacgaaatacttcggcggg 120
Query: 699 acctggcgttacgatcccagggtcggatatgatgaaaacggtttacctttgcacacaagc 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acctggcgttacgatcccagggtcggatatgatgaaaacggtttacctttgcacacaagc 180
Query: 759 atgtataaacacttgaggacaaatctaccaaagcccacaatggaactgagaggcttccct 818
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtataaacacttaaggacaaatctaccaaagcccacaatggaactgagaggcttccct 240
Query: 819 gtaccgaaagatatgccatcctttccgaagtggtcaatttattacgaatatatcaaagac 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtaccgaaagatatgccatcctttccgaagtggtcaatttattacgaatatatcaaagac 300
Query: 879 tatgtaaagcatttcggcttagaaaagcgcataatgtttgaacacaacgttgaactggtt 938
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 tatgtaaagcatttcggcttagaaaagcgcataatgtttgaacacaacgtggaactggtt 360
Query: 939 tcgagagttggaaatgcatggagggtgaagtacaagaatttagtttcgggagaaaacttt 998
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgagagttggagatgcatggagggtgaagtacaagaatttagtttcgggagaaaacttt 420
Query: 999 gagcaggaatttgattttgtcatcgtcgggactggtcattacagtgatcctaatctgccg 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagcaggaatttgattttgtcatcgtcgggactggtcattacagtgatcctaatctgccg 480
Query: 1059 gatgtacctcatgaagacctttttaaaggcactataatgcacagtcacgactacagagag 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgtacctcatgaagacctttttaaaggcactataatgcacagtcacgactacagagag 540
Query: 1119 ccggatcgcttcaaggatcgtcgagttctgatcgttggtgccggaccttcagggatggac 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccggatcgcttcaaggatcgtcgagttctgatcgttggtgccggaccttcagggatggac 600
Query: 1179 atagccatagatgtggcttacgtcagtaaaaccctcgtccacagccaccacagccccggc 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atagccatagatgtggcttacgtcagtaaaaccctcgtccacagccaccacagccccggc 660
Query: 1239 ttcggaaccgattccttccccaaacattacattcaaaaaccggacatacgagagtacaat 1298
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 661 ttcggaaccgattccttcccccaacattacatccaaaaaccggacatacgagagtacaat 720
Query: 1299 gagaccggcgtcatatttaaagatggtaccta 1330
|||| |||||||||||||||||||||||||||
Sbjct: 721 gagaacggcgtcatatttaaagatggtaccta 752
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 367,501
Number of extensions: 9973
Number of successful extensions: 9973
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9973
Number of HSP's successfully gapped: 1
Length of query: 2350
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2333
Effective length of database: 8,119,229
Effective search space: 18942161257
Effective search space used: 18942161257
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)