BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22123 (UTR included)
(1843 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2394_C1 1447 0.0
>BF14_2394_C1
Length = 788
Score = 1447 bits (730), Expect = 0.0
Identities = 773/788 (98%), Gaps = 7/788 (0%)
Strand = Plus / Plus
Query: 317 cgatttatcatataaaatacacattttataagaaataattagtttctttttaacttgata 376
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgatttctcatataacatacacattttataagaaataattagtttctttttaacttgata 60
Query: 377 ttggtgatatgtttttgcatggttgaagaccgtaaatcgcagaaataaacaaacttatta 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggtgatatgtttttgcatggttgaagaccgtaaatcgcagaaataaacaaacttatta 120
Query: 437 tataaagttatagagagaaatatttcaaattgaaatagatttatttcatat-------tt 489
|||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 121 tataaagttatagagagaaatatttcaaattgaaatagatttattttttttcagtaaata 180
Query: 490 accgaaaaaatatgcctctgccacctgcgttggctgctcgattggcaaagcgaggtatat 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accgaaaaaatatgcctctgccacctgcgttggctgctcgattggcaaagcgaggtatat 240
Query: 550 taaaagaacctacgaataatgacgtatcttttgagaccccaacagctcaggtaaacgaag 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaagaacctacgaataatgacgtatcttttgagaccccaacagctcaggtaaacgaag 300
Query: 610 agatcatagcagaagattacgataataatacagaccaattgaatcataatgaacgtttct 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agatcatagcagaagattacgataataatacagaccaattgaatcataatgaacgtttct 360
Query: 670 gggaaggtatagaaggtgtaaatgttgatcctattaaaggtcataagggttgccccaata 729
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 gggaaggtatagaaggtgtaaatgttgatcccattaaaggtcataagggttgccccaata 420
Query: 730 aaagtaatatttaccatgagtgctcgaaatattgtgttaaaacatggaagcaaggaaaac 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaagtaatatttaccatgagtgctcgaaatattgtgttaaaacatggaagcaaggaaaac 480
Query: 790 catcaccatctgacaaatatttggaagtcaaacgaaaagttttagaactgtggcccctac 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catcaccatctgacaaatatttggaagtcaaacgaaaagttttagaactgtggcccctac 540
Query: 850 caccaggatgggaagaagtatatgatgaaggcactgggcattattacttttggaatgttc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caccaggatgggaagaagtatatgatgaaggcactgggcattattacttttggaatgttc 600
Query: 910 ataataatttagtatcatggttgccaccatcccatcctcgagcaattcaaagcgaaagtg 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ataataatttagtatcatggttgccaccatcccatcctcgagcaattcaaagcgaaagtg 660
Query: 970 cagcacatctacgtgaagaaagactattacgagaaggggatgaaagtgacgacagtagtg 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagcacatctacgtgaagaaagactattacgagaaggggatgaaagtgacgacagtagtg 720
Query: 1030 aagcttcagatcaagaagtgccgcagcaacatcaaaggatgaaaagaattgatagaaagg 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 721 aagcttcagatcaagaagtgccgcagcaacatcaaaggatgaaaagaattgataggaagg 780
Query: 1090 atagggaa 1097
||||||||
Sbjct: 781 atagggaa 788
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,262
Number of extensions: 6273
Number of successful extensions: 6273
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6273
Number of HSP's successfully gapped: 2
Length of query: 1843
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1826
Effective length of database: 8,119,229
Effective search space: 14825712154
Effective search space used: 14825712154
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)