BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22138 (UTR included)
(1696 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2277_C1 82 3e-15
BF14_2277_C2 78 5e-14
>BF14_2277_C1
Length = 938
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1336 gtatcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgtg 1388
|||||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct: 173 gtatcgtgtcgtgtcgtgtcgtgtcgtgtcgtatcgtatcgtgtcgtgtcgtg 225
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1339 tcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgtg 1388
|||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 181 tcgtgtcgtgtcgtgtcgtgtcgtatcgtatcgtgtcgtgtcgtgtcgtg 230
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1340 cgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgt 1387
||||||||||||| |||||||||||||||| |||||||||||| ||||
Sbjct: 162 cgtgtcgtgtcgtatcgtgtcgtgtcgtgtcgtgtcgtgtcgtatcgt 209
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1339 tcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcg 1386
||||||||||||||||||| |||| |||||| ||||||||||||||||
Sbjct: 186 tcgtgtcgtgtcgtgtcgtatcgtatcgtgtcgtgtcgtgtcgtgtcg 233
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1339 tcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgtg 1388
||||||||| ||||||||||||||||||||| ||||||| |||| |||||
Sbjct: 166 tcgtgtcgtatcgtgtcgtgtcgtgtcgtgtcgtgtcgtatcgtatcgtg 215
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1339 tcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgtg 1388
|||| |||||||||||||||||||||||||| || |||| ||||||||||
Sbjct: 171 tcgtatcgtgtcgtgtcgtgtcgtgtcgtgtcgtatcgtatcgtgtcgtg 220
>BF14_2277_C2
Length = 817
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 1336 gtatcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcg 1386
||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 710 gtatcgtatcgtgtcgtgtcgtatcgtgtcgtgtcgtgtcgtgtcgtgtcg 760
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1336 gtatcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgtg 1388
||||||||||||||||| |||| ||||||||||| || |||||||||||||||
Sbjct: 695 gtatcgtgtcgtgtcgtatcgtatcgtgtcgtgtcgtatcgtgtcgtgtcgtg 747
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1339 tcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgtg 1388
||||||||| |||| |||||||||||||| | ||||||||||||||||||
Sbjct: 703 tcgtgtcgtatcgtatcgtgtcgtgtcgtatcgtgtcgtgtcgtgtcgtg 752
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1339 tcgtgtcgtgtcgtgtcgtgtcgtgtcgtgtggtgtcgtgtcgtgtcgtg 1388
|||| |||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 708 tcgtatcgtatcgtgtcgtgtcgtatcgtgtcgtgtcgtgtcgtgtcgtg 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 182,474
Number of extensions: 3911
Number of successful extensions: 3911
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3897
Number of HSP's successfully gapped: 10
Length of query: 1696
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1679
Effective length of database: 8,119,229
Effective search space: 13632185491
Effective search space used: 13632185491
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)