BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22147 (UTR included)
(1717 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2309_C1 898 0.0
>BF14_2309_C1
Length = 1296
Score = 898 bits (453), Expect = 0.0
Identities = 465/469 (99%)
Strand = Plus / Plus
Query: 478 agacgttacatcacagtcaaacgatggaaggctgttcagcgccgttggtggtaaaattcg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 agacgttacatcacagtcaaacgatggaaggctgttcagcgccgttggtggtaaaattcg 772
Query: 538 ctgatacccagaaggagaaagaacagaaaaagttacaggccatgcaagcgagtttatggg 597
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 773 ctgatacccagaaggagaaagaacagaaaaagttacaggccatgcaagcaagtttatggg 832
Query: 598 ggcttacgactcctgtagcccctacttacctagcgtcggaagcggcgctatcaccagcaa 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ggcttacgactcctgtagcccctacttacctagcgtcggaagcggcgctatcaccagcaa 892
Query: 658 cgcagctgcaactgctgcaacagctgcaggcagtcgggcttcagcagcaattactgcaag 717
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 893 cgcagctgcaactgctgcaacagctgcaggcagtcgggcttcagcagcaattgctgcaag 952
Query: 718 gtcaagggtcaactttattacaaggtgttaactatccagatgtcggtttcaatggcgcag 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 gtcaagggtcaactttattacaaggtgttaactatccagatgtcggtttcaatggcgcag 1012
Query: 778 ggctgggcggtggtgtcggtgttagcgctggtggtgaacagctaggtggcctgctggcac 837
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1013 ggctgggcggtggtgtcggtgttagcgctggtggtgaacagctaggtggtctgctggcac 1072
Query: 838 ctgtcagcgtacagaacttagcggcgctggcagccatgacgcaacctgtcacgcaagcag 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 ctgtcagcgtacagaacttagcggcgctggcagccatgacgcaacctgtcacgcaagcag 1132
Query: 898 cacccatagctcaaccagcggcacctcaacccgcagcaccccaattatg 946
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1133 cacccatagctcaaccagcggcacctcaacccgcagcaccgcaattatg 1181
Score = 129 bits (65), Expect = 2e-29
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 gatgcgcaaggccagagcaagggttgcgctttcgttaccttcgtctctaaacaggcggcc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 640 gatgcgcaaggccagagcaagggttgcgctttcgtcaccttcgtctctaaacaggcggcc 699
Query: 61 atcgctgct 69
|||||||||
Sbjct: 700 atcgctgct 708
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,583
Number of extensions: 6214
Number of successful extensions: 6214
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6214
Number of HSP's successfully gapped: 2
Length of query: 1717
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1700
Effective length of database: 8,119,229
Effective search space: 13802689300
Effective search space used: 13802689300
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)