BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22149 (UTR included)
(3385 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1798_C1 1624 0.0
BF01001X1F07 305 2e-82
BF01010A1B01 165 6e-40
>BF14_1798_C1
Length = 827
Score = 1624 bits (819), Expect = 0.0
Identities = 825/827 (99%)
Strand = Plus / Plus
Query: 350 ttcacgcgtttggaacagtgttccgtagttcgagccgggaacagcgcgtacgatgcgacc 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcacgcgtttggaacagtgttccgtagttcgagccgggaacagcgcgtacgatgcgacc 60
Query: 410 gcttatttatttcgctgcgataatcgctctctccaccgttgaagggggacggattcttgg 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttatttatttcgctgcgataatcgctctctccaccgttgaagggggacggattcttgg 120
Query: 470 gctcttcccgcacacaggcaagagccaccagatggtcttcgagccgctgttaaagaaact 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctcttcccgcacacaggcaagagccaccagatggtcttcgagccgctgttaaagaaact 180
Query: 530 cgctgaaagaggacaccaagtcacagtagtgtcgttcttccccttaaaaaaaccaatcgc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgctgaaagaggacaccaagtcacagtagtgtcgttcttccccttaaaaaaaccaatcgc 240
Query: 590 aaattacactgatgtcagccttgaggggatcgcgactttaggtgtggaaactattaatct 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaattacactgatgtcagccttgaggggatcgcgactttaggtgtggaaactattaatct 300
Query: 650 aggctggtatgaggaatttagtatttggacaaagctaccaaaaataggtagagtaatcaa 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggctggtatgaggaatttagtatttggacaaagctaccaaaaataggtagagtaatcaa 360
Query: 710 gcaactgtcggagttccaacctttagcaggaatggcgttagacgtttgcagtaaggctgt 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaactgtcggagttccaacctttagcaggaatggcgttagacgtttgcagtaaggctgt 420
Query: 770 agattgggttcctttaaaggaagctctgcagaagaattacgatttagtgctggttgaaaa 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agattgggttcctttaaaggaagctctgcagaagaattacgatttagtgctggttgaaaa 480
Query: 830 tttcaacagtgattgtatgatgggtctgttgcacatttacgatataaaggctcctgtaat 889
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 tttcaacagtgattgtatgatgggtctgttgcacatttacgatataaaggctccagtaat 540
Query: 890 tgcattactgtcaagtgccatgatgccatggtcatcggaccgtattggcgtaacagataa 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgcattactgtcaagtgccatgatgccatggtcatcggaccgtattggcgtaacagataa 600
Query: 950 cccctcttacgtgccaattataagttcaacctttaccccgacaatgaatttaatggatcg 1009
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 cccctcttacgtgccaattataagttcaacctttacccccacaatgaatttaatggatcg 660
Query: 1010 aattgaaaacacgttccttaacgcctatcataagatatggttccgttacgcaatacaatt 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aattgaaaacacgttccttaacgcctatcataagatatggttccgttacgcaatacaatt 720
Query: 1070 aaaagaacaagcactcatagaaacacattttagaacgaaaataccagatctggacatatt 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaaagaacaagcactcatagaaacacattttagaacgaaaataccagatctggacatatt 780
Query: 1130 atcacgaaacataacattgatgttcttgaatacgtttcatgctttga 1176
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atcacgaaacataacattgatgttcttgaatacgtttcatgctttga 827
>BF01001X1F07
Length = 772
Score = 305 bits (154), Expect = 2e-82
Identities = 172/177 (97%), Gaps = 2/177 (1%)
Strand = Plus / Minus
Query: 3209 cgatttaaaaatagacacattcaataaaaaagtagttttaaattccgtaattgcgagttc 3268
||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 772 cgatttaaaaatagacatattcaataaaa--gtagttttaaattccataattgcgagttc 715
Query: 3269 ctagaatgtatagtatagttgttaataatacaacattatgtatagtatagttgttaataa 3328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ctagaatgtatagtatagttgttaataatacaacattatgtatagtatagttgttaataa 655
Query: 3329 taagataaatataaaacttgtatttcaatttaactttaaggtttaacattttactct 3385
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tacgataaatataaaacttgtatttcaatttaactttaaggtttaacattttactct 598
>BF01010A1B01
Length = 743
Score = 165 bits (83), Expect = 6e-40
Identities = 95/99 (95%)
Strand = Plus / Minus
Query: 3284 tagttgttaataatacaacattatgtatagtatagttgttaataataagataaatataaa 3343
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 731 tagttgttaataatacaacattatgtttagtatagttgttaataatacgataaatataaa 672
Query: 3344 acttgtatttcaatttaactttaaggtttaacattttac 3382
|||| |||||||||||||||||||||||||||| |||||
Sbjct: 671 acttttatttcaatttaactttaaggtttaacactttac 633
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 404,943
Number of extensions: 8162
Number of successful extensions: 8162
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8158
Number of HSP's successfully gapped: 3
Length of query: 3385
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3367
Effective length of database: 8,109,745
Effective search space: 27305511415
Effective search space used: 27305511415
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)