BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22169 (UTR included)
(1852 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3049_C1 507 e-143
>BF14_3049_C1
Length = 1359
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 780 ggttacttcctgttcgggaccaagttaactcgcctccagatgcaatgcttcagcaccaag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 ggttacttcctgttcgggaccaagttaactcgcctccagatgcaatgcttcagcaccaag 1163
Query: 840 cgcgtcgtcatctgtacgccggaatgcgacgacactgctgaaaactcaacgcctccgcta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 cgcgtcgtcatctgtacgccggaatgcgacgacactgctgaaaactcaacgcctccgcta 1223
Query: 900 ctaaacacttccatggattcccagtcgtctgacatatttgtttgtcaaactcgtacctgt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 ctaaacacttccatggattcccagtcgtctgacatatttgtttgtcaaactcgtacctgt 1283
Query: 960 atacagccctctcactactttcccgccaatacccaagatggcggcgaacacagcaacgcc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 atacagccctctcactactttcccgccaatacccaagatggcggcgaacacagcaacgcc 1343
Query: 1020 agctgttactatggcg 1035
||||||||||||||||
Sbjct: 1344 agctgttactatggcg 1359
Score = 307 bits (155), Expect = 3e-83
Identities = 202/223 (90%), Gaps = 21/223 (9%)
Strand = Plus / Plus
Query: 583 gcgatcgagagcaagcgaacgccatggaagcgacgaccagtcgcaacacaagctcggggc 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gcgatcgagagcaagcgaacgccatggaagcgacgaccagtcgcaacacaagctcggggc 522
Query: 643 aagtcagcaag---------------------accctggtgaacggtcatcagaccctgg 681
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 523 aagtcagcaagtgggacacatttaagataaggaccctggtgaacggtcatcagaccctgg 582
Query: 682 tgttcgtcgtccataacgtggtggggtacctgctgatgttggccgtcatgatctacaacg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tgttcgtcgtccataacgtggtggggtacctgctgatgttggccgtcatgatctacaacg 642
Query: 742 ttcacctcatgctggccgtggtcttcggcatgatgttgggtta 784
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttcacctcatgctggccgtggtcttcggcatgatgttgggtta 685
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,954
Number of extensions: 6254
Number of successful extensions: 6254
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6254
Number of HSP's successfully gapped: 3
Length of query: 1852
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1835
Effective length of database: 8,119,229
Effective search space: 14898785215
Effective search space used: 14898785215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)