BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22174 (UTR included)
(2542 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A1D04 1344 0.0
BF14_2534_C1 771 0.0
>BF01041A1D04
Length = 698
Score = 1344 bits (678), Expect = 0.0
Identities = 693/698 (99%)
Strand = Plus / Plus
Query: 563 tgagtttctaaactctagaaaaaatgctaataatctagccgacattcttcaaatgtttga 622
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 tgagtttcttaactctagaaaaaatgccaataatctagccgacattcttcaaatgtttga 60
Query: 623 ggctgaaacggaaaattacaccccgttgcttttaacaattgaagtgatctttacggagct 682
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggctgaaacggaaaattacactccgttgcttttaacaattgaagtgatctttacggagct 120
Query: 683 attaaaacgaggtgatttagtacaacatattgaacccttaaaaccaatagaccgtagtcc 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaaaacgaggtgatttagtacaacatattgaacccttaaaaccaatagaccgtagtcc 180
Query: 743 tgaggcagaatatacaagatggctcaacgagtgttatgagaccgctctctcccgtgtatt 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaggcagaatatacaagatggctcaacgagtgttatgagaccgctctctcccgtgtatt 240
Query: 803 ggaatgtattcgacgcggacgcaccagctctcgccttcaggccctagtcacatcttgcaa 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaatgtattcgacgcggacgcaccagctctcgccttcaggccctagtcacatcttgcaa 300
Query: 863 attgatgcaagctgagggaaaatatcctttagaacacaccagtggttacttcttcccctc 922
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 attgatgcaagctgagggaaaatatcctttagaacacaccagtgggtacttcttcccctc 360
Query: 923 tgttagattgaagaatatatttttggtactcctggattctgaaatttccatgtcagcacc 982
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 tgttagattgaagaatatatttttggtactcctggattctgagatttccatgtcagcacc 420
Query: 983 aatagctcgcttccaggagttcacagagtacagagacgtgcagcaacatggccttaaagt 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatagctcgcttccaggagttcacagagtacagagacgtgcagcaacatggccttaaagt 480
Query: 1043 actgtcgacactggcttgtcataaatctccatctcagacgtacatgcaaaattatctaga 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actgtcgacactggcttgtcataaatctccatctcagacgtacatgcaaaattatctaga 540
Query: 1103 gttgttcgacaagttgttggcatcggaaataccagcagaagtgaggaagacaaaagataa 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttgttcgacaagttgttggcatcggaaataccagcagaagtgaggaagacaaaagataa 600
Query: 1163 gatcggtgaagaagatttcaaagtactgtgcgctaatgaaggcaagccgtctttcccata 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatcggtgaagaagatttcaaagtactgtgcgctaatgaaggcaagccgtctttcccata 660
Query: 1223 caacacatccgtgtgtcgtcgttatgccaaccgttgct 1260
||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caacacatccgtgtgtcgtcgttatgccaaccgttgct 698
>BF14_2534_C1
Length = 1419
Score = 771 bits (389), Expect = 0.0
Identities = 416/424 (98%), Gaps = 2/424 (0%)
Strand = Plus / Plus
Query: 1750 acccctacgtgatggaggagtcttctgcgtcgcggtccagagccctgggttcgtctttat 1809
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2 acccctacgtgatggaggagtcttctgcgtcgcggtccagagccctgggttcgtctctat 61
Query: 1810 gggaggtgcgagccttgacgcggcactggcagcccacgctggccaccgtcgccagacagg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gggaggtgcgagccttgacgcggcactggcagcccacgctggccaccgtcgccagacagg 121
Query: 1870 tcactgaccctgacaggcgagcccccatcgacatcgatcatgctggagaagagatgttcg 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcactgaccctgacaggcgagcccccatcgacatcgatcatgctggagaagagatgttcg 181
Query: 1930 atgcggaactaaagaagaggttcaagacgatagaagtgaacttcatacgtcctcagagta 1989
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 182 atgcggaactaaagaagaggttcaagacg--agaagtgaacttcatacgtcctcagagta 239
Query: 1990 tgtcgctgccgtccggggagagactcgcgcagtactgggagataatggcctgaacggaag 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgtcgctgccgtccggggagagactcgcgcagtactgggagataatggcctgaacggaag 299
Query: 2050 agtagactaagacgtcagaacacttgcacttgactaacagctgaagaagaacttggatat 2109
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 attagactaagacgtcagaacacttgcacttgactaacagctgaagaagaacttggatat 359
Query: 2110 ctcttgaaatgttccacagataatgttagatggatcttctatgtgtcggcatcataattg 2169
||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 360 ctcttgaaatgttccacagataatgttagctggatctactatgtgtcggcataataatta 419
Query: 2170 ctat 2173
||||
Sbjct: 420 ctat 423
Score = 620 bits (313), Expect = e-177
Identities = 331/336 (98%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 2209 tgtgttggcatccagtatgaacatttccagtttatcattaatcaacctccttggatcgat 2268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgtgttggcatccagtatgaacatttccagtttatcattaatcaacctccttggatcgat 491
Query: 2269 ataaatgttcatttgtttt--tttttatttcaactggatagtgctcgactgtcgagaaaa 2326
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ataaatgttcatttgtttttttttttatttcaactggatagtgctcgactgtcgagaaaa 551
Query: 2327 acaggaaatgctccatatatagtgtacagaaggtacggaccgacaaacaaagctgtcgga 2386
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 552 acaggaaatgctccatatgtagtgtacagaaggtacggacccacaaacaaagctgtcgga 611
Query: 2387 agagtccaagaggtatctatagtttaagtaaagatatataattcttttttgacattgccc 2446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agagtccaagaggtatctatagtttaagtaaagatatataattcttttttgacattgccc 671
Query: 2447 taatcaaaagatcagtcaaaggatttgatggagcaaaaaaataaatgaccaaataaagta 2506
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 672 taatcaaaagatcagtcaaaggatttgattgagcaaaaaaataaatgaccaaataaagta 731
Query: 2507 aatctagatcctgtaaaatagtgtgtccctagacct 2542
||||||||||||||||||||||||||||||||||||
Sbjct: 732 aatctagatcctgtaaaatagtgtgtccctagacct 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,042
Number of extensions: 4513
Number of successful extensions: 4513
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4511
Number of HSP's successfully gapped: 3
Length of query: 2542
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2525
Effective length of database: 8,119,229
Effective search space: 20501053225
Effective search space used: 20501053225
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)