BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22175 (UTR included)
(2707 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2B11 1538 0.0
>BF01057B2B11
Length = 873
Score = 1538 bits (776), Expect = 0.0
Identities = 842/863 (97%), Gaps = 2/863 (0%)
Strand = Plus / Plus
Query: 1469 cgtaaagaaaatgttatccaacaaaggacaatttataacagactacttaaacaattactc 1528
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 cgtaaagaaaatgttatccaacaaaggacaattcataacagactacttaaacaattactc 60
Query: 1529 caaaagcattttctacacttcaaacacatacgaccagtaccaagcattgtgccgcaaact 1588
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaagcattttctatacttcaaacacatacgaccagtaccaagcattgtgccgcaaact 120
Query: 1589 taacttgttagaattagaatcgagacgacaagatgctcagatattaaataaagaaactag 1648
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 taacttgttagaattagaatcgatacgacaagatgctcagatattaaataaagaaactag 180
Query: 1649 accattaccagattattcaattctgaaggaagagagtaagaaaatacagtttaaagtcag 1708
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 accattaccagattattcaattctgaaggaagagagtaagaaaatacagttaaaagtcag 240
Query: 1709 agccttttttgcgggagaaattgaaatccccgaaccagaggagcccacggaggttgatgc 1768
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agccttctttgcgggagaaattgaaatccccgaaccagaggagcccacggaggttgatgc 300
Query: 1769 atccaatgaacatgataactcaactgtgttaccactagttgataagaattcacaaaatgc 1828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atccaatgaacatgataactcaactgtgttaccactagttgataagaattcacaaaatgc 360
Query: 1829 actgcgaaggaaaattgtttgccagcatttaaacaaggtgttgccagatttattacgatc 1888
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 361 actgcgaaggaaaattgtttgccagaatttaaacaaggtgttgccagatttattacgatc 420
Query: 1889 acttggcttattaaatctaacaatcagttctgacatacgactgcttgtaaatacattcaa 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acttggcttattaaatctaacaatcagttctgacatacgactgcttgtaaatacattcaa 480
Query: 1949 attgaaagcagacaatattatgttcaaacctatacagtggacattgatcgctttagtgtt 2008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attgaaagcagacaatattatgttcaaacctatacagtggacattgatcgctttagtgtt 540
Query: 2009 tataaaattgttatctataagggacgaacaattaaaaggtttactggagcatgaaacggc 2068
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 541 tataaaattgttatctataagggacgaacaattgaaaggtttactggagcatgaaacggc 600
Query: 2069 attcaaacacatgcagctcttgttgctcagttataatcaagacggaggttatttagacag 2128
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 601 attcaaacacatgcagctcttgttgctcagctataatcaagacggaggttatttagacag 660
Query: 2129 gctcatttcttggttgaccgatgtaaataggttactcgacgtaaatgataatcaaatgac 2188
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcttatttcttggttgaccgatgtaaataggttactcgacgtaaatgataatcaaatgac 720
Query: 2189 tattgaaaaaaatatgtagttagtgttggcatttgttaattaatgcttaaaaaatctatt 2248
|||||||||||||||||||||||||||||| |||||||||||| || ||||||| ||||
Sbjct: 721 tattgaaaaaaatatgtagttagtgttggcctttgttaattaaagcctaaaaaacctata 780
Query: 2249 tatttatatgttctaaatatagtagattattttgattgaataacggatctgcgattattt 2308
|||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||
Sbjct: 781 tatttatatgttctgaatatagtggattattttgattgaataatggatctgcga--attt 838
Query: 2309 tttttagatactcataatgagat 2331
|||| | ||||||||||||||||
Sbjct: 839 ttttaaaatactcataatgagat 861
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,090
Number of extensions: 8496
Number of successful extensions: 8496
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8495
Number of HSP's successfully gapped: 1
Length of query: 2707
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2690
Effective length of database: 8,119,229
Effective search space: 21840726010
Effective search space used: 21840726010
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)