BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22176 (UTR included)
(2212 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_916_C1 1231 0.0
>BF14_916_C1
Length = 1543
Score = 1231 bits (621), Expect = 0.0
Identities = 624/625 (99%)
Strand = Plus / Minus
Query: 1588 agtctctagaaaacttcgtacagtatttgacgttcattgaggtggtctccgcgcgacctg 1647
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1437 agtctctagaaaacttcgtacagtatttgacattcattgaggtggtctccgcgcgacctg 1378
Query: 1648 agactagcagggctcgcgtcgaccgaggaagattcttacatcgcgatttatctccataca 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 agactagcagggctcgcgtcgaccgaggaagattcttacatcgcgatttatctccataca 1318
Query: 1708 aataaaaaatgcatcagtttatatagttaagtcactaacgacacacacaggaacgcggcg 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 aataaaaaatgcatcagtttatatagttaagtcactaacgacacacacaggaacgcggcg 1258
Query: 1768 ggccttctcgcctagatgtctggcagtctccagcgccgcacgcctcactcacacgatcca 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 ggccttctcgcctagatgtctggcagtctccagcgccgcacgcctcactcacacgatcca 1198
Query: 1828 taataaatatacacaacgctatctaaaacacttgtatccatttgttaacaggttatgtac 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 taataaatatacacaacgctatctaaaacacttgtatccatttgttaacaggttatgtac 1138
Query: 1888 acagcacacatttacgatgtacctaatctgtatctgacactcagatcaaatttggctaca 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 acagcacacatttacgatgtacctaatctgtatctgacactcagatcaaatttggctaca 1078
Query: 1948 actcagtctgttacaattcatctttgaattcttcgtcttcgccgccggcgccctgtgggg 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 actcagtctgttacaattcatctttgaattcttcgtcttcgccgccggcgccctgtgggg 1018
Query: 2008 ggactccgccctgtccttggtacagcttggcgatgattggctgaacgacatcttccagtg 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 ggactccgccctgtccttggtacagcttggcgatgattggctgaacgacatcttccagtg 958
Query: 2068 atttcttctgcttcttgtagtcctcggcgtcagcgtcttggttgtcttcgagccatttga 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 atttcttctgcttcttgtagtcctcggcgtcagcgtcttggttgtcttcgagccatttga 898
Query: 2128 tggatgcgtcgatggcctcttccattttgctcttctcgtcgtcggaaagcttggagccta 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tggatgcgtcgatggcctcttccattttgctcttctcgtcgtcggaaagcttggagccta 838
Query: 2188 gcttctctttgtcctgaagttggtt 2212
|||||||||||||||||||||||||
Sbjct: 837 gcttctctttgtcctgaagttggtt 813
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,418
Number of extensions: 4311
Number of successful extensions: 4311
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4311
Number of HSP's successfully gapped: 1
Length of query: 2212
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2195
Effective length of database: 8,119,229
Effective search space: 17821707655
Effective search space used: 17821707655
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)