BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22208 (UTR included)
(2224 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1H03 1564 0.0
>BF01058B1H03
Length = 867
Score = 1564 bits (789), Expect = 0.0
Identities = 808/813 (99%), Gaps = 1/813 (0%)
Strand = Plus / Plus
Query: 636 gtagtcagaattccatatgcagctaaaactccttctacaccaggggagagtaaggaggtg 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 gtagtcagaattccatatgcagctaaaactccttctacaccaggggagagtaaggaggtg 115
Query: 696 attgaaacatctgttatatatgacttattagtgtcagcatacaaaatgttcagaatgttt 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 attgaaacatctgttatatatgacttattagtgtcagcatacaaaatgttcagaatgttt 175
Query: 756 gttggtccatttaaagacataccacctgaagatatttatacaaaatgtgaacaattcttc 815
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gttggtccgtttaaagacataccacctgaagatatttatacaaaatgtgaacaattcttc 235
Query: 816 acaccatacataatgtccagaaatattgcaaatgacttaagtaatattatacaagggata 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 acaccatacataatgtccagaaatattgcaaatgacttaagtaatattatacaagggata 295
Query: 876 aattatttaccgctagaaaagaattcattctttaaagtggtgtgtttcatagatttactg 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aattatttaccgctagaaaagaattcattctttaaagtggtgtgtttcatagatttactg 355
Query: 936 gaaattacttacccggattttaaatgtgtatcttttgtctacaatgaacagcttatatgg 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gaaattacttacccggattttaaatgtgtatcttttgtctacaatgaacagcttatatgg 415
Query: 996 aatggacttgcaacaaatgatatgttaacattatatcaatacttagtacaaactttactt 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aatggacttgcaacaaatgatatgttaacattatatcaatacttagtacaaactttactt 475
Query: 1056 cccaaacaagttgagaaggaaatacaaggtggagctgtaacagctgcggtaagacatggc 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cccaaacaagttgagaaggaaatacaaggtggagctgtaacagctgcggtaagacatggc 535
Query: 1116 cgcttcataagtcccccagaaggtattcgtacttcggaagatcttaaaaaactacataag 1175
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cgctttataagtcccccagaaggtattcgtacttcggaagatcttaaaaaactacataag 595
Query: 1176 gtgtacttaatgagagaagatgatactgaaatgaaacaatattatttaataatatacaga 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gtgtacttaatgagagaagatgatactgaaatgaaacaatattatttaataatatacaga 655
Query: 1236 accctcagtgcaacagtctgcttcacaattgatgtaaacactaccctcgacctagatacg 1295
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 656 accctcagtgcaacggtctgcttcacgattgatgtaaacactaccctcgacctagatacg 715
Query: 1296 ttcaaatctctagatgcatttattgggcccaaactatctacaatagcatcctctatcagt 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ttcaaatctctagatgcatttattgggcccaaactatctacaatagcatcctctatcagt 775
Query: 1356 gagcaatgtgcggttcatgctttacaaaatgcacaactttcaagctcggaacacaagttt 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 776 gagcaatgtgcggttcatgctttacaaaatgcacaactttcaagctcggaacacaag-tt 834
Query: 1416 ttgtacttcaatcgactgaatctggcatgtaaa 1448
|||||||||||||||||||||||||||||||||
Sbjct: 835 ttgtacttcaatcgactgaatctggcatgtaaa 867
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 335,177
Number of extensions: 7571
Number of successful extensions: 7571
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7570
Number of HSP's successfully gapped: 1
Length of query: 2224
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2207
Effective length of database: 8,119,229
Effective search space: 17919138403
Effective search space used: 17919138403
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)