BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22227 (UTR included)
(1126 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1E04 291 1e-78
>BF01012A1E04
Length = 841
Score = 291 bits (147), Expect = 1e-78
Identities = 235/263 (89%), Gaps = 1/263 (0%)
Strand = Plus / Minus
Query: 607 ataaagagaaaatcgtctaaatctgaaccggaacccgatagtatcccatatattgtcttt 666
||||||| ||||||||||||||||| |||| ||||||| ||||||||||||| ||||||
Sbjct: 457 ataaagaaaaaatcgtctaaatctgcgccgggacccgatggtatcccatatatagtcttt 398
Query: 667 aaaaaa-tgttcattagttcgcaaacatctcgtaaatatatactgtaaaatctggtcaag 725
|||||| ||| ||| ||||| ||||||||| | |||||||| |||||||||||||||
Sbjct: 397 aaaaaaatgtccatcggttcgtaaacatctcacatatatatacgataaaatctggtcaag 338
Query: 726 gcagcaaatcccggagcacttcaggaaagcaatttttgtcctcattcccaaaaaagatcg 785
| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaagcaaatcccggagtgcttcgggaaagcaatttttgtcctcattcccaaaaaagatcg 278
Query: 786 agttacggatccgaaagatactaaactgatagccttaacaaataccatatctaaaatatt 845
||| || |||||||||||||||| || |||||||||||||||||| ||||| ||||| ||
Sbjct: 277 agtcacagatccgaaagatactagaccgatagccttaacaaatactatatccaaaatctt 218
Query: 846 tttctcagatctacaaacgagaa 868
|||||||| ||||||||||||||
Sbjct: 217 tttctcagttctacaaacgagaa 195
Score = 131 bits (66), Expect = 3e-30
Identities = 93/102 (91%)
Strand = Plus / Minus
Query: 913 agaacccaacactttgctgtcggaaagtttaaaaaatgctaggaaaagcgaaaggcaaat 972
||||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||
Sbjct: 115 agaacacaacactttgctgtcggagagtttaaaagatgctaggaaaagcgagaggcaaat 56
Query: 973 taaagtctgttggatagacttaaagaactcgatcgggtcgat 1014
|| ||| ||||||||||||||| ||||| || ||||||||||
Sbjct: 55 tacagtttgttggatagacttagagaacgcgttcgggtcgat 14
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 119,297
Number of extensions: 1969
Number of successful extensions: 1969
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1968
Number of HSP's successfully gapped: 2
Length of query: 1126
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1109
Effective length of database: 8,119,229
Effective search space: 9004224961
Effective search space used: 9004224961
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)