BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22230 (UTR included)
(1641 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3133_C1 817 0.0
BF01042A1C02 672 0.0
>BF14_3133_C1
Length = 1501
Score = 817 bits (412), Expect = 0.0
Identities = 430/436 (98%)
Strand = Plus / Plus
Query: 1100 agcccaacatcttgggaaacatattctattagatagattaatatggcgccgactgcactg 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 agcccaacatcttgggaaacatattctattagatagattaatatggcgccgactgcactg 756
Query: 1160 tctcgctgaacatatagcgtcgtatctgcaacttaaagacggacaaacaagggttttatc 1219
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 757 tctcgctgaacatatagcgtcgtatctgcaacttaaagacggacaaacaagggtgttatc 816
Query: 1220 acactgggcctgttataaggtaactcaaccccacttggacaacgagagtgctgcgaggga 1279
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 817 acactgggcctgttataaggtaactcaaccccacttggacaacgagagtgcagcgaggga 876
Query: 1280 aataggagagaaattgaaaaatatccctggcatatcctattcaaccatagctatgaaagc 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aataggagagaaattgaaaaatatccctggcatatcctattcaaccatagctatgaaagc 936
Query: 1340 tgctgagaaaggtcgaaaagcgttggccattaaaatcttagagtacgagacccgcagttc 1399
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 937 tgcggagaaaggtcgaaaagcgttggccattaaaatcttagagtacgagacccgcagctc 996
Query: 1400 tctccaggtgcccttattagtgtcactgggcgaaggttcctccgctctcatgaaggcaac 1459
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 tctccaggtgccctgattagtgtcactgggcgaaggttcctccgctctcatgaaggcaac 1056
Query: 1460 cgccagcggtaacactgacctcgtttacaccgtccttctacatctcaaagaaaagatggg 1519
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 cgccagccgtaacactgacctcgtttacaccgtccttctacatctcaaagaaaagatggg 1116
Query: 1520 caaacacgagtttgag 1535
||||||||||||||||
Sbjct: 1117 caaacacgagtttgag 1132
Score = 450 bits (227), Expect = e-126
Identities = 251/259 (96%)
Strand = Plus / Plus
Query: 805 agcgtcgcagtcaccgcgccgatgagtacattcgtctggtgaagccagatcttgccgctg 864
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 438 agcgtcgcagtcaccgcgccgacgagtacattcgtctggtgaagccagatcttgccgctg 497
Query: 865 cggttcaagactgtatagacgcgtctaccttcgaattcgaccctgatgtccagaaaatgt 924
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 498 cggttcaagactgtatagacgcgtctaccttcgaattcgacccagatgtccagaaaatgt 557
Query: 925 taattcgagcggcacagttcggtaaaggcttcatcagcgatccgcttctgacggagcatt 984
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 558 taattcgagcggcacagttcggcaaaggcttcatcagcgatccgcttctcacggagcatt 617
Query: 985 acgtggatacatgtcgttggctgagagtgctaaatgctctacgaggggttagagtaggca 1044
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct: 618 acgtggatacatgtcgttggctgagagtgctaaatgctctacgaggggtcagagtgggga 677
Query: 1045 tacctttgacttacttgca 1063
|||| ||||||||||||||
Sbjct: 678 tacccttgacttacttgca 696
>BF01042A1C02
Length = 765
Score = 672 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 468 aggaaatttgatttgtataacatggtatggtcaatggacgaaggccttggcaacatgatt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aggaaatttgatttgtataacatggtatggtcaatggacgaaggccttggcaacatgatt 288
Query: 528 gttagtggagcacagtatggaggtcctattgctgttgttagagacagaaaacagtttgta 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gttagtggagcacagtatggaggtcctattgctgttgttagagacagaaaacagtttgta 348
Query: 588 aggattgtgacgacagctaagcccgtcatcactatatataactgtgttgggaacattata 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aggattgtgacgacagctaagcccgtcatcactatatataactgtgttgggaacattata 408
Query: 648 tcaaagattctgtggaacaatggagttttaatacacatgggctggtcggacggtgaacag 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tcaaagattctgtggaacaatggagttttaatacacatgggctggtcggacggtgaacag 468
Query: 708 cttctatgtattcaagagagtggtgatgttttgatatatgatatgtttggggcataccaa 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cttctatgtattcaagagagtggtgatgttttgatatatgatatgtttggggcataccaa 528
Query: 768 aagacattcagtttagggcaagaagttagagatacaaag 806
|||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aagacattcagtttagggcaagaagttagagatacaaag 567
Score = 434 bits (219), Expect = e-121
Identities = 228/231 (98%)
Strand = Plus / Plus
Query: 34 tttggaaaagaaacagaaaggcgacaacatttattaaatttaacgattccgcaataattt 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggaaaagaaacagaaaggcgacaacatttattaaatttaacgattccgcaataattt 60
Query: 94 aatttaaaacattttatagtcaagaggcgcttaaagaaatgaatggccttttaagatttt 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttaaaacattttatagtcaagaggcgcttaaagaaatgaatggccttttaagatttt 120
Query: 154 gtttttaaattatatttgtttgttttcactgtataattggcgttattataataatacaaa 213
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 121 gtttttaaattatatttgtttgttttcactgtataattggtgttatcataataatacaaa 180
Query: 214 atgtcagctttattaacagcagattggtttcatctagattcctattacagg 264
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 atgtcagctttattaacagcagattggtttcatctagattcctactacagg 231
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,069
Number of extensions: 4416
Number of successful extensions: 4416
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4416
Number of HSP's successfully gapped: 4
Length of query: 1641
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1624
Effective length of database: 8,119,229
Effective search space: 13185627896
Effective search space used: 13185627896
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)