BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22234 (UTR included)
(1871 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3392_C1 605 e-172
>BF14_3392_C1
Length = 1075
Score = 605 bits (305), Expect = e-172
Identities = 390/419 (93%), Gaps = 7/419 (1%)
Strand = Plus / Plus
Query: 1453 gatatttatataacgcggaatgtttataaataaaaaaatcaggagtagagttgtccataa 1512
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gatatttatataacgcggaatgtttataaataaaaaaatcaggagtagagttgtccttaa 60
Query: 1513 aaaaataactttaacattattccatgttttataaagagaagtcttatgccacttccagcc 1572
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaataactttaaaattattccatgttttataaagagaagtcttatgccacttccagcc 120
Query: 1573 attacattttattaagcattttttttattcaatacttttattatatatatatatactttt 1632
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 attacattttattcagcattttttttattcaatacttttatatcatatatatatactttt 180
Query: 1633 tataattctacatatttaaattcagagcgaccatcttcatattattattagtcgatacaa 1692
||||||| |||||||||||||||| | || |||||||| ||||||||||||||||||||
Sbjct: 181 tataattatacatatttaaattcatactgaacatcttcacattattattagtcgatacaa 240
Query: 1693 acatgataaattatctaagaataaaattaatttagttcgagtatgttttcgttattcgta 1752
|||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 241 acatgataaattatctcggaataaaattaatttcgttcgagtacgttttcgttattcgta 300
Query: 1753 taaaatagtaaacgcatggacatagacaaatagcgattactttttaaatatttttttact 1812
||||||| |||||||||| |||| ||||| ||| ||||||||||||||||||||
Sbjct: 301 taaaata-------catggacataaacaattagcggttattttttaaatatttttttact 353
Query: 1813 tatttttgtattttttctttttcattctttacatagatatcgtttatactgtttgatgt 1871
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 354 tatttttgtattttttctttttcactctttacatagatatcgtttagactgtttgatgt 412
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,865
Number of extensions: 9765
Number of successful extensions: 9765
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9765
Number of HSP's successfully gapped: 2
Length of query: 1871
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1854
Effective length of database: 8,119,229
Effective search space: 15053050566
Effective search space used: 15053050566
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)