BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22269 (UTR included)
(1465 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1632_C1 975 0.0
>BF14_1632_C1
Length = 1039
Score = 975 bits (492), Expect = 0.0
Identities = 528/539 (97%), Gaps = 2/539 (0%)
Strand = Plus / Plus
Query: 293 tgaataacaaaaaaaaaaaactatttataaataatttacagatttttttttgtaacaaag 352
||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgaataacaaaaaaaaaaa--tatatataaataatttacagaattttttttgtaacaaag 58
Query: 353 aacatgcgaactataaatgtcttttgtattaatcacactagttaaaattacagagaaatg 412
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aacatgcgaactataaatatcttttgtattaatcacactagttaaaattacagagaaatg 118
Query: 413 aatcggtatatcgtcgggaacacagatacgcgtatctctaagatatgagtgatgtatttt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aatcggtatatcgtcgggaacacagatacgcgtatctctaagatatgagtgatgtatttt 178
Query: 473 gtattattttatgtaaaataagcataaaatgagtagatgcgacttcaaaattgtgttgct 532
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 179 gtattattttatgtaaaataagtataaaatgagtagatgcgacttcaaaattgtgttgct 238
Query: 533 cggcagcgagcatgttggaaaaacgagcttggtgttgagattcgttaattgcaggtttaa 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cggcagcgagcatgttggaaaaacgagcttggtgttgagattcgttaattgcaggtttaa 298
Query: 593 ttctggcacaccatatcaaaacacaatcggagctgctttctgcgctaagacgatgcaatc 652
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 299 ttctggcacaccatatcaaaacactatcggagctgctttctgcgctaagacgatgcaatc 358
Query: 653 caacggcaaagatctcaacataggcatatgggatacggccggtagcgaacgctacgaagc 712
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 359 caacggcaaagatctcaacataggcatatgggatacggctggtagcgaacgctacgaagc 418
Query: 713 catgactcgcatgtactatagaggtgcacatgcggcaattatatgctacgatccatgctg 772
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gatgactcgcatgtactatagaggtgcacatgcggcaattatatgctacgatccatgctg 478
Query: 773 tgcggcgtcctgggctagactgagacattggttggctgaattacggactgtggaagagg 831
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 479 tgcggcgtcctgggctagactgaggcattggttggcggaattacggactgtggaagagg 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,625
Number of extensions: 20553
Number of successful extensions: 20553
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20552
Number of HSP's successfully gapped: 1
Length of query: 1465
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1448
Effective length of database: 8,119,229
Effective search space: 11756643592
Effective search space used: 11756643592
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)