BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22272 (UTR included)
(5458 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_777_C1 2032 0.0
>BF14_777_C1
Length = 1209
Score = 2032 bits (1025), Expect = 0.0
Identities = 1081/1098 (98%), Gaps = 5/1098 (0%)
Strand = Plus / Plus
Query: 4366 gaggcgataaaaatgagatacaaaggatattaaacgatattccaaaagatataatagaag 4425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaggcgataaaaatgagatacaaaggatattaaacgatattccaaaagatataatagaag 61
Query: 4426 caatcccacctcctgaacctgtggaaattccagacaggaaaccagatcccgacataatac 4485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caatcccacctcctgaacctgtggaaattccagacaggaaaccagatcccgacataatac 121
Query: 4486 gagtgtccaaaaagccagaatctccagttaaaagaatccaagacccggatacgataaggg 4545
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gagtgtccaaaaaaccagaatctccagttaaaagaatccaagacccggatacgataaggg 181
Query: 4546 tcacgaaaggtcaggattcaccctcaaggagactgagacaggaagcggaaccactgaaga 4605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcacgaaaggtcaggattcaccctcaaggagactgagacaggaagcggaaccactgaaga 241
Query: 4606 gagcgaaaggtgctggcgattcgccaagactaactcaggcagcacagacgagacctgacc 4665
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gagcgaaaggcgctggtgattcgccaagactaactcaggcagcacagacgagacctgacc 301
Query: 4666 atcacaaaagcagccccaatgttgcttccagacacaaagctgaatctccaaaatcacgag 4725
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atcacaaaagcagcccaaatgttgcttccagacacaaagctgaatctccaaaatcacgag 361
Query: 4726 aagagcgtaagtccgcgacctactcccgttcagattccaaacgtcaggaatcagcggaac 4785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagagcgtaagtccgcgacctactcccgttcagattccaaacgtcaggaatcagcggaac 421
Query: 4786 gcaagatgtacacagctagttcagagtctgaattattcgagtgcgccattttacctatct 4845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcaagatgtacacagctagttcagagtctgaattattcgagtgcgccattttacctatct 481
Query: 4846 tccacaaactactaaccgaacgacacaagagtcaaccgcacggcctcaacctaacatacg 4905
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 482 tccacaaactactaaccgaacgacacaagagtcaaccgcacggccttaacctaacatacg 541
Query: 4906 gtgtcagctgtcctaacatctctattaaatgcgatattgttgaatatttataaataaata 4965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtgtcagctgtcctaacatctctattaaatgcgatattgttgaatatttataaataaata 601
Query: 4966 ccattcagaatactttcacctaaaacggaacaccatttatattcggtactgaatctagtt 5025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ccattcagaatactttcacctaaaacggaacaccatttatattcggtactgaatctagtt 661
Query: 5026 ttaggattttctaggataattaaaacttatgatttacgatggttggatttttcctataga 5085
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttaggattttctaggataattaatacttatgatttacgatggttggatttttcctataga 721
Query: 5086 attctgttcaaaacattaatattaaaatgatgatagtttagtgttaggtaggtaaatgag 5145
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 722 attctgttcaaaacattaatattaaaatgacgatagtttagtgttaggtaggtaaatgag 781
Query: 5146 cttggttcacacaccggctagaatttatgctaaaatcaattatgtacataaattatatca 5205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 cttggttcacacaccggctagaatttatgctaaaatcaattatgtacataaattatatca 841
Query: 5206 ataagtactaaagggtagaattagatttaaattatatgttaatagcgctacctgtaccac 5265
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 842 ataagtactaaagggtagaattagatttaaataatatgttaatagcgctacctgtaccac 901
Query: 5266 ggtctaaaaatgctatgttttattat---agtgttct--tgttacaaatagttaaaatct 5320
||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||
Sbjct: 902 ggtctaaaaatgcaatgttttattattatagtgttcaaatgttacaaatagttaaaacct 961
Query: 5321 ttgtacgcgaatttctttttctaagacacatttttagtaatggcaacatttgaatttaac 5380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ttgtacgcgaatttctttttctaagacacatttttagtaatggcaacatttgaatttaac 1021
Query: 5381 gattgcttcagttgtttacctatttagatttaattatgactgttgtttttagctgttatt 5440
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1022 gattgcttcagttgtttacctatttagatttaattatgactgttttttttagctgttatt 1081
Query: 5441 atatattacatcagttac 5458
||||||||||||||||||
Sbjct: 1082 atatattacatcagttac 1099
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 524,815
Number of extensions: 11145
Number of successful extensions: 11145
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11144
Number of HSP's successfully gapped: 1
Length of query: 5458
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5440
Effective length of database: 8,109,745
Effective search space: 44117012800
Effective search space used: 44117012800
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)