BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22280 (UTR included)
(2818 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A2F04 1421 0.0
>BF01030A2F04
Length = 733
Score = 1421 bits (717), Expect = 0.0
Identities = 729/733 (99%)
Strand = Plus / Plus
Query: 448 gttttgacctgaatttttttgcaaatcactgttccaatatattatttcaaacaatggaaa 507
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gttttgacctgaatttttttgcaaatcactgttccaatatattatttcgaacaatggaaa 60
Query: 508 caagtctcgagtatgaagatttgttgattaaattaagagccaaactcaatgaaaacaaga 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagtctcgagtatgaagatttgttgattaaattaagagccaaactcaatgaaaacaaga 120
Query: 568 tcaaattgtgggaaccgccttacatttcggaaactgaggagtactcccagagccttaagg 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaattgtgggaaccgccttacatttcggaaactgaggagtactcccagagccttaagg 180
Query: 628 atctctctaaaaaatattctgaagaacttaaacatgatgaaaatataataatccaagctc 687
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctctctaaaaaatattccgaagaacttaaacatgatgaaaatataataatccaagctc 240
Query: 688 tttttgaactccaactgcattcaatagaaaggtcaaaagctaataatgagtttaagcaga 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttttgaactccaactgcattcaatagaaaggtcaaaagctaataatgagtttaagcaga 300
Query: 748 ctggttacgccacactcagggtgaaagccacagtacagggagaaaaacctagaatgttga 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggttacgccacactcagggtgaaagccacagtacagggagaaaaacctagaatgttga 360
Query: 808 agatcatgaaacagctagatgtttcaggtgatgaattgattgaagccgtcgcaaacttgc 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agatcatgaaacagctagatgtttcaggtgatgaattgattgaagccgtcgcaaacttgc 420
Query: 868 tggaggttgctaaaaatagagtcaaacttatatacaatggtaaattaataagacagagtt 927
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggaggttgctaaaaatagagtcaaacttatatacaatggtaaattaataagacagagtc 480
Query: 928 caaatcttgaagaacaaggcatcaaaaacggtgtacagataatggcactggttatggctg 987
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaatcttgaagaacaaggaatcaaaaacggtgtacagataatggcactggttatggctg 540
Query: 988 aagctccagagcagattaagaaagaggataaaatttatcgtgagatgaaatccacattag 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagctccagagcagattaagaaagaggataaaatttatcgtgagatgaaatccacattag 600
Query: 1048 atgatgctacattactgtcggagtatgtggacgatatcgctgatgatgaagagtacatga 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgatgctacattactgtcggagtatgtggacgatatcgctgatgatgaagagtacatga 660
Query: 1108 agctggaagatcaatctggtaaggcaattaagctgccgccagctgagcgtaggtccttac 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agctggaagatcaatctggtaaggcaattaagctgccgccagctgagcgtaggtccttac 720
Query: 1168 tgatagggctggc 1180
|||||||||||||
Sbjct: 721 tgatagggctggc 733
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,421
Number of extensions: 4569
Number of successful extensions: 4569
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4569
Number of HSP's successfully gapped: 1
Length of query: 2818
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2801
Effective length of database: 8,119,229
Effective search space: 22741960429
Effective search space used: 22741960429
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)