BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22300 (UTR included)
(3790 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B1A09 1285 0.0
>BF01028B1A09
Length = 684
Score = 1285 bits (648), Expect = 0.0
Identities = 669/676 (98%)
Strand = Plus / Plus
Query: 1286 aagtggtggccaaaaaaggaaagctgagaaggctagattaagaaaaggcctcagtatttt 1345
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 aagtggtggccaaaaaaggaaagctgagaaggctagattaagaaaaggtctcagtatttt 60
Query: 1346 agttggtacaccaggaaggataaatgatcatttaagacacacacattcattgaattttgc 1405
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 61 agttggtacaccaggaaggataaatgatcatttacgacacacacattcattaaattttgc 120
Query: 1406 gaaaacaggatgccttatattggacgaagctgatcgcttgttagatatgggctatgagaa 1465
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaacaggatgccttatattggacgaagctgatcgcttgttagatatgggctatgagaa 180
Query: 1466 agatgtatccgcaattgtcaaagctatagaggatcacaaaaaggcggctacatacgatcc 1525
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatgtagccgcaattgtcaaagctatagaggatcacaaaaaggcggctacatacgatcc 240
Query: 1526 catggcgttagttaagcaaacaattgtaaagaaagttagtgataatgaagaagttgaaga 1585
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 241 catggcgttagttaagcaaacaattgtaaagaaagttagtgataatgaagaggttgtaga 300
Query: 1586 acagaatgaaacagaaaatgttgttgaaacgagtgtagaacatcctttaactaaagtttt 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acagaatgaaacagaaaatgttgttgaaacgagtgtagaacatcctttaactaaagtttt 360
Query: 1646 tctgtctaaagagagacagacaatacttttgtctgctacactgacaaaggctgttgaaaa 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctgtctaaagagagacagacaatacttttgtctgctacactgacaaaggctgttgaaaa 420
Query: 1706 tttggcaggaataactatgcaggatcctgtgtttatagatacatcagatggtaaggctgt 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttggcaggaataactatgcaggatcctgtgtttatagatacatcagatggtaaggctgt 480
Query: 1766 tgttgccgattccttgaaacctaaaccagtccaggaagagcctaaccaaaatttacctga 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgttgccgattccttgaaacctaaaccagtccaggaagagcctaaccaaaatttacctga 540
Query: 1826 agatgtgaataatgtcaaagaaaccagcgaacataatactaaagaccaagcaagacgaaa 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agatgtgaataatgtcaaagaaaccagcgaacataatactaaagaccaagcaagacgaaa 600
Query: 1886 tgaccaatcatgtgattcaagtagaactggcctgaaaccctttagtggaaccaatcatcc 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgaccaatcatgtgattcaagtagaactggcctgaaaccctttagtggaaccaatcatcc 660
Query: 1946 agaactattcggtgaa 1961
||||||||||||||||
Sbjct: 661 agaactattcggtgaa 676
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 448,816
Number of extensions: 8987
Number of successful extensions: 8987
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8987
Number of HSP's successfully gapped: 1
Length of query: 3790
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3772
Effective length of database: 8,109,745
Effective search space: 30589958140
Effective search space used: 30589958140
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)