BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22314 (UTR included)
(1465 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1697_C1 1538 0.0
>BF14_1697_C1
Length = 847
Score = 1538 bits (776), Expect = 0.0
Identities = 785/788 (99%)
Strand = Plus / Plus
Query: 394 agtttgcatttggtactttacaagtaacatctgcaactgtttatttgtggtgaaaaaatc 453
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2 agtttgcatttggtactttacaagtaacatctgcaactgtttatttgtggtaaaaaaatc 61
Query: 454 tgtccttatttgaaatcgatacttgcacaaactaaaaatatccagacatggctttcataa 513
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tatccttatttgaaattgatacttgcacaaactaaaaatatccagacatggctttcataa 121
Query: 514 taccaaatttgtgtaaatgtttatgcttgaggaatcgagccggccttaaccttgtacaaa 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taccaaatttgtgtaaatgtttatgcttgaggaatcgagccggccttaaccttgtacaaa 181
Query: 574 ctgcgtcatatcatgccaatgtgattgaccactacgaaaatcctcgtaatgttgggtctt 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgcgtcatatcatgccaatgtgattgaccactacgaaaatcctcgtaatgttgggtctt 241
Query: 634 tagacaaaaaggatgctaatgttggcacagggttggttggggcaccagcttgcggtgatg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tagacaaaaaggatgctaatgttggcacagggttggttggggcaccagcttgcggtgatg 301
Query: 694 ttatgaagttgcaaattaaagttgacgaaaacgggaaaataatagacgccaagtttaaga 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttatgaagttgcaaattaaagttgacgaaaacgggaaaataatagacgccaagtttaaga 361
Query: 754 cctttggttgcggctctgctattgcttccagctctcttgctacagagtgggtcaagggca 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cctttggttgcggctctgctattgcttccagctctcttgctacagagtgggtcaagggca 421
Query: 814 aaacagttgatgaagcattgaaactgaagaacactgacattgctaaggaattgtccttgc 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaacagttgatgaagcattgaaactgaagaacactgacattgctaaggaattgtccttgc 481
Query: 874 ctcctgtgaaactgcattgttctatgctagctgaagatgctatcaaagctgcactttcag 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctcctgtgaaactgcattgttctatgctagctgaagatgctatcaaagctgcactttcag 541
Query: 934 actacaggatcaagcagcaaggaaagaagtaggtcatgattatcatgagttggaacagat 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 actacaggatcaagcagcaaggaaagaagtaggtcatgattatcatgagttggaacagat 601
Query: 994 ctgtgatggctatttaagtctggggatgtcatattcaaaagatgtttaatgtttagaagc 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctgtgatggctatttaagtctggggatgtcatattcaaaagatgtttaatgtttagaagc 661
Query: 1054 tctttttccttgaaaattatatagatccatagaaaaaaatactagcgctataaatttgtc 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tctttttccttgaaaattatatagatccatagaaaaaaatactagcgctataaatttgtc 721
Query: 1114 cccttatttagcagtaattaatatatctatgttgaattttaattagagagaataaataat 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cccttatttagcagtaattaatatatctatgttgaattttaattagagagaataaataat 781
Query: 1174 agcttaga 1181
||||||||
Sbjct: 782 agcttaga 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 228,733
Number of extensions: 5381
Number of successful extensions: 5381
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5381
Number of HSP's successfully gapped: 1
Length of query: 1465
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1448
Effective length of database: 8,119,229
Effective search space: 11756643592
Effective search space used: 11756643592
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)