BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22364 (UTR included)
(1675 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A1B06 1061 0.0
>BF01021A1B06
Length = 826
Score = 1061 bits (535), Expect = 0.0
Identities = 604/626 (96%), Gaps = 7/626 (1%)
Strand = Plus / Plus
Query: 929 ggagaagaagagagaggaagacacaaggagagaagcggaagaagtggagaagatggctat 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggagaagaagagagaggaagacacaaggagagaagcggaagaagtggagaagatggctat 261
Query: 989 ccgtcgacagaatgatgagaattgcaatgaagtagaaactgaaagcgatttgatgaacaa 1048
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 262 ccgtcgacagaatgatgagaattgcaatgaagtagaaactgaaagcgaattgatgaacaa 321
Query: 1049 tgaatcaaaacaaagtgatgatagtgatggaataagaggaaaag------ataacgatga 1102
||||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 322 tgaatcaaaggaaagtgatgatagtgatggaatacaaggaaaagataaagataacgatga 381
Query: 1103 atcagccgcgagggtagttcacatcgccgagacaaaacgaccaggaaacaatttgacaat 1162
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 382 atcagcggcgagggtagttcacatcgccgagacgaaacgaccaggaaacaatttgacaat 441
Query: 1163 agttgatacttgacggcttgtactgaccatggtatgagtcgctgaagtgtcaacgcgcgg 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 442 agttgatacttgacggcttgtactgaccatggtatgagtcgctgaagtgtcaacgcgggg 501
Query: 1223 agacggccggcgcgggggacacggatgtacgaatttatattacaatatatataatagtta 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agacggccggcgcgggggacacggatgtacgaatttatattacaatatatataatagtta 561
Query: 1283 gtgaaacgccagaaaaatagcacacaaaaatttaattgtttttccatggaccctccaccc 1342
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 562 gtgaaacgccaaaaaaatagcacacaaaaatataattgtttttccatggaccctccaccc 621
Query: 1343 attatattattgtcgaggattcaaaaatgatgtgagaagtctagcgaaataatgatttcc 1402
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 622 attatattattgtcgaggattcaaaaatgatgtgagaagtccagcgaaataatgatttcc 681
Query: 1403 acggccaaggtgaggacgtagaattaattaaaaatgattttgtacacaatcttttataac 1462
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 acggccaaggtgaggacatagaattaattaaaaatgattttgtacacaatcttttataac 741
Query: 1463 tcgaggatgctaagtgcctgtttgagcgggagtaaggaggtgaggaccctagtgtagtta 1522
||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 742 tcgaggatgctaagtgcctgtttga-ccggagtcaggaggtgaggaccctagtgtagtta 800
Query: 1523 catagcttcatatatatagttggtag 1548
|||| |||||||||||||||||||||
Sbjct: 801 cataccttcatatatatagttggtag 826
Score = 325 bits (164), Expect = 1e-88
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 818 agcggatgtagagatggctatatcctgggtccttaaacctcagcaccgatctaggatagt 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcggatgtagagatggctatatcctgggtccttaaacctcagcaccgatctaggatagt 60
Query: 878 cttccagcgattcatgccctggtggaacgctgagagacgaagggagttagcggagaagaa 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttccagcgattcatgccctggtggaacgctgagagacgaagggagttagcggagaagaa 120
Query: 938 gagagaggaagacacaaggagagaagcggaagaagtggagaaga 981
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagagaggaagacacaaggagagaagcggaagaagtggagaaga 164
Score = 105 bits (53), Expect = 2e-22
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 929 ggagaagaagagagaggaagacacaaggagagaagcggaagaagtggagaaga 981
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ggagaagaagagagaggaagacacaaggagagaagcggaagaagtggagaaga 209
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 170,493
Number of extensions: 2950
Number of successful extensions: 2950
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2949
Number of HSP's successfully gapped: 4
Length of query: 1675
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1658
Effective length of database: 8,119,229
Effective search space: 13461681682
Effective search space used: 13461681682
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)