BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22373 (UTR included)
(2488 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A1G03 1358 0.0
BF14_3240_C1 80 2e-14
BF01025B1E11 68 7e-11
>BF01051A1G03
Length = 720
Score = 1358 bits (685), Expect = 0.0
Identities = 706/713 (99%)
Strand = Plus / Plus
Query: 1450 agatgataaagggttcttcagacttcctgggcctgaaccactacaccacctacctggtca 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatgataaagggttcttcagacttcctgggcctgaaccactacaccacctacctggtca 60
Query: 1510 ctaagaataaatccaagatatcaatgaccccgtccttcgaagccgacacgggcggtattc 1569
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaagaataaatctaagatatcaatgaccccgtccttcgaagccgacacgggcggtattc 120
Query: 1570 tatcgcaaaaagccgaatggccgaaatcaaactcaacatggctaaaggtcgtgccgtggg 1629
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcgcaaaaagccgaatggccgaaatcaaactcaacatggctaaaggtcgtgccgtggg 180
Query: 1630 gtttcaggaaagctctgaactggataaagaacaaatacgacaatccaatagtgttcataa 1689
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 gtttcaggaaagctctgaactggataaagaacaaatacgacaatccgatagtgttcataa 240
Query: 1690 cagagaacggcatagcgctagagagaggtctcacagacagacgccgcgtcaactacatcg 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagagaacggcatagcgctagagagaggtctcacagacagacgccgcgtcaactacatcg 300
Query: 1750 acgcttacctcagagcgttacacgccgccatcttgaaagacaactgtcaagtgattggtt 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 acgcttacctcagagcgttacacgccgccatcttgaaagacaactgtcaagtgatcggtt 360
Query: 1810 acacatattggagtcttattgacaacttcgagtggacgcggggttactcagaacgtttcg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acacatattggagtcttattgacaacttcgagtggacgcggggttactcagaacgtttcg 420
Query: 1870 gattgtttgaagtcgactacgagtccccgaataagactcgaacggcgcgactgtccgcgg 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gattgtttgaagtcgactacgagtccccgaataagactcgaacggcgcgactgtccgcgg 480
Query: 1930 cttacttcagccgactcgcgcgggacaggtgcttgccaaacatggactttacggactagc 1989
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttacttcagccgactcgcgcgggacaggtgcttgccaaacatggactttacggactaga 540
Query: 1990 agacagaggctttaataatgatttaattaaaatttttattagatacataccacaacgaat 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agacagaggctttaataatgatttaattaaaatttttattagatacataccacaacgaat 600
Query: 2050 actcgactgtaaagtatatatcagaaaattcattttcttgtggctatagattcaacgaca 2109
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actcgactttaaagtatatatcagaaaattcattttcttgtggctatagattcaacgaca 660
Query: 2110 ttttatcgatattcatataatatatataaaacatgtgaaaaaaaaataaaaaa 2162
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 ttttatcgatattcatataatatatataaaacatgtgaaaaaaaaaaaaaaaa 713
>BF14_3240_C1
Length = 2110
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 2437 gtgactttagtcgagacttaaattttatttcattcaaaagtcaatcccggat 2488
||||||| |||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 1553 gtgacttcagtcgagaattaaattttatttcatacaaaagtcaatcccggat 1604
>BF01025B1E11
Length = 786
Score = 67.9 bits (34), Expect = 7e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 2426 agttcctaattgtgactttagtcgagactt--aaattttatttcattcaaaagtcaatcc 2483
|||||||||||||||||| ||||| | || |||||||||||||||||||||| |||||
Sbjct: 131 agttcctaattgtgacttcagtcggggctgtaaaattttatttcattcaaaagttaatcc 190
Query: 2484 cggat 2488
|||||
Sbjct: 191 cggat 195
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,544
Number of extensions: 8145
Number of successful extensions: 8145
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8144
Number of HSP's successfully gapped: 3
Length of query: 2488
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2471
Effective length of database: 8,119,229
Effective search space: 20062614859
Effective search space used: 20062614859
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)