BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22393 (UTR included)
(2095 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B1D04 1439 0.0
>BF01031B1D04
Length = 758
Score = 1439 bits (726), Expect = 0.0
Identities = 750/758 (98%)
Strand = Plus / Plus
Query: 656 cgaaaagactgaatatgcggtgcttgttataagcagtccagataatgaaatgaaaagaga 715
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 cgaaaacactgaatatgcggtgcttgttacaagcagtccagataatgaaatgaaaagaga 60
Query: 716 cgctataagggcgacatgggctaattttattaataatatattcattgaaaacggtgaaac 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctataagggcgacatgggctaattttattaataatatattcattgaaaacggtgaaac 120
Query: 776 gttattcaagtgggataactcctggctcagaacaaatacaaaaacagatttaataaaaat 835
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttatttaagtgggataactcctggctcagaacaaatacaaaaacagatttaataaaaat 180
Query: 836 attttttgtaattggaacacaaaatctagaaaaggataagctcataaaaattaataatga 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attttttgtaattggaacacaaaatctagaaaaggataagctcataaaaattaataatga 240
Query: 896 acttagcagaagtaatgacttattactgttaaataagttcgaagactcttatgagaatct 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttagcagaagtaatgacttattactgttaaataagttcgaagactcttatgagaatct 300
Query: 956 aacattaaagttactttattctctagattttcttagcaataatttaaagaaattaaaata 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacattaaagttactttattctctagattttcttagcaataatttaaagaaattaaaata 360
Query: 1016 tgttatcaaatgtgacgatgattcatttgttagggttgatttaatagtaaaagatttgga 1075
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgttatcaaatgtgacgatgactcatttgttagggttgatttaatagtaaaagatttgga 420
Query: 1076 agcttttggaccgaaaatggatgatccatctattagttcttatgttacttataaggagac 1135
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agcttttggaccgaaaatggaggatccatctattagttcttatgttacttataaggagac 480
Query: 1136 tgaacaaaaccagaaaggactatattggggatattttaatggcagggctcaagtattttt 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaacaaaaccagaaaggactatattggggatattttaatggcagggctcaagtattttt 540
Query: 1196 aaatgggaagtggcaggaaaaaaaatggtttctttgtgacacctatcttccttatgcttt 1255
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatgggaagtggcaggaaaaaagatggtttctttgtgacacctatcttccttatgcttt 600
Query: 1256 aggaggtggctatgttatatcccacaatatagttgattatatttcaagaaacttggagta 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggaggtggctatgttatatcccacaatatagttgattatatttcaagaaacttggagta 660
Query: 1316 cctaagtgtttataattctgaagatgtatctatgggtgtatggacggcagcactaaacgg 1375
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 661 cctaagtgtttataattctgaagatgtatctatgggtgtatggacagcagcactaaatgg 720
Query: 1376 aataaatagagtgcacgacataagatttgacacacagt 1413
||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aataaatagagtgcacgacataagatttgacacacagt 758
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 389,189
Number of extensions: 9526
Number of successful extensions: 9526
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9526
Number of HSP's successfully gapped: 1
Length of query: 2095
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2078
Effective length of database: 8,119,229
Effective search space: 16871757862
Effective search space used: 16871757862
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)