BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22398 (UTR included)
(1279 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1864_C1 835 0.0
>BF14_1864_C1
Length = 798
Score = 835 bits (421), Expect = 0.0
Identities = 427/429 (99%)
Strand = Plus / Plus
Query: 342 ttctaggttatgaaatctttattataaaaaagtaaacattatttgcggaaaataaagtaa 401
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttctaggttatgaaatctatattataaaaaagtaaacattatttgcggaaaataaagtaa 61
Query: 402 ctaaagaaacatagatattaataaataggaggtatagaataaaatgtggtagtaattaag 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctaaagaaacatagatattaataaataggaggtatagaataaaatgtggtagtaattaag 121
Query: 462 gtggattttctttacaacactaacattttcttttaaatcatggcgaattcaattttggcc 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtggattttctttacaacactaacattttcttttaaatcatggcgaattcaattttggcc 181
Query: 522 aagtcctctgcactatggcaccgtgctacaataagtgttattcaaccataccggactaca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aagtcctctgcactatggcaccgtgctacaataagtgttattcaaccataccggactaca 241
Query: 582 accagcaagcattacaatccgaaattcagaaaacatcgcgctcagaagtacctgaagatt 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 accagcaagcattacaatccgaaattcagaaaacatcgcgctcagaagtacctgaagatt 301
Query: 642 gatctaccggacatgaacgaggatccagacaccatccccccggagaagatgaggcagaag 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatctaccggacatgaacgaggatccagacaccatccccccggagaagatgaggcagaag 361
Query: 702 atgaaagagcgcggggttttaccccctcgcccctggatggaacgaccattttatatttct 761
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgaaagagcgcggggttttaccccctcgcccctggatggaacgaccattttatatttcc 421
Query: 762 gctactggt 770
|||||||||
Sbjct: 422 gctactggt 430
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,492
Number of extensions: 5415
Number of successful extensions: 5415
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5415
Number of HSP's successfully gapped: 1
Length of query: 1279
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1262
Effective length of database: 8,119,229
Effective search space: 10246466998
Effective search space used: 10246466998
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)