BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22413 (UTR included)
(1213 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 127 4e-29
BF01060B1D11 76 1e-13
>BF01047B2H03
Length = 758
Score = 127 bits (64), Expect = 4e-29
Identities = 197/240 (82%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 311 aacttgttatgtctgcgggaacgcggttggaactgctaagcgtttgctggtggaatgtag 370
|||||| ||| |||||| | | || ||||||| |||| ||| ||||||| ||| ||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 371 gatactcctggatagcagtcaatact-cttgtcgccacgttacggttctagatatcatac 429
| |||||||||||||| ||||||||| | ||| ||| | || |||| || || ||||||
Sbjct: 305 gctactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcatac 246
Query: 430 gtgaagcggttagtctttcggtagctagagcgtaaaaagaaatagccacaaacgagcgaa 489
||||||||||||| ||| ||||| | ||| ||||||||||| ||||||||| ||||
Sbjct: 245 atgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgat 186
Query: 490 caataggttttatgagagaaggcactagagctttaaaatcaaacagcaagccttactcta 549
||| |||||| ||||||||| || ||| ||| |||| ||||||| ||||||||||||||
Sbjct: 185 taattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactcta 126
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 113 atataaaatccatgcaatgagtttagatatgcagaacgagtggttggacataga 166
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 502 atataacatccatgcaatgagtttagatatgcagaacgagtggttagacataga 449
>BF01060B1D11
Length = 799
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 113 atataaaatccatgcaatgagtttagatatgcagaacgagtggttggacataga 166
|||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||
Sbjct: 330 atataagatccatgcaatgcgtttagagatgcagaacgagtggttagacataga 277
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 140,048
Number of extensions: 2890
Number of successful extensions: 2890
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2890
Number of HSP's successfully gapped: 4
Length of query: 1213
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1196
Effective length of database: 8,119,229
Effective search space: 9710597884
Effective search space used: 9710597884
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)