BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22427 (UTR included)
(1849 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A2A04 1667 0.0
>BF01062A2A04
Length = 863
Score = 1667 bits (841), Expect = 0.0
Identities = 850/853 (99%)
Strand = Plus / Plus
Query: 294 taattttatgtaacaacctgaatgtacagtgttgtttagttcgatacattggtgaaagag 353
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 taattttatataacaacctgaatgtacagtgttgtttagttcgatacattggtgaaagag 70
Query: 354 taaataaaaattcaaatataggtttattaaaaaaataaacaatatattttcggcagccct 413
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tacataaaaattcaaatataggtttattaaaaaaataaacaatatattttcggcagccct 130
Query: 414 aaaacatactttaactatgcaattttgctgttagctgactcatatatcaaattactgtaa 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aaaacatactttaactatgcaattttgctgttagctgactcatatatcaaattactgtaa 190
Query: 474 tttattgattgaagtataagtattaaaatgtgggataaagttatatacgtttttatgata 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tttattgattgaagtataagtattaaaatgtgggataaagttatatacgtttttatgata 250
Query: 534 acagttgcaacatatatattaaagcaactcttttctgaaacacctaactatgtcaagttt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acagttgcaacatatatattaaagcaactcttttctgaaacacctaactatgtcaagttt 310
Query: 594 cagtcaaaatttttagtattttacatatgggcttcagttgtgtctttgttcttgatgcca 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cagtcaaaatttttagtattttacatatgggcttcagttgtgtctttgttcttgatgcca 370
Query: 654 ttttttgtgtttactcctaaaaatgtcaagaattcactttttgggacacaaataataaag 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttttttgtgtttactcctaaaaatgtcaagaattcactttttgggacacaaataataaag 430
Query: 714 catgtaacaaaattaatagaggtaaaatggcatttaagaaatggcaaagttctgtctgag 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 catgtaacaaaattaatagaggtaaaatggcatttaagaaatggcaaagttctgtctgag 490
Query: 774 gacagaggagctgtaattatatcaaatcaccaatcatctattgatatactgggtatgttt 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gacagaggagctgtaattatatcaaatcaccaatcatctattgatatactgggtatgttt 550
Query: 834 aacatatggcatgtagctgttaaaatagcagctgtagcaaggaaagagctgttctatgta 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aacatatggcatgtagctgttaaaatagcagctgtagcaaggaaagagctgttctatgta 610
Query: 894 tggccgtttggtctggcagcataccttgctggtgtcgtgttcattgatagaaacaattca 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggccgtttggtctggcagcataccttgctggtgtcgtgttcattgatagaaacaattca 670
Query: 954 aaagacgcatacaaaacacttaaggccacttccgaggtcatgatcaagaataagacaaaa 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaagacgcatacaaaacacttaaggccacttccgaggtcatgatcaagaataagacaaaa 730
Query: 1014 atctggttattcccagaaggaacgaggaataaaaatattacatcattgttaccttttaag 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atctggttattcccagaaggaacgaggaataaaaatattacatcattgttaccttttaag 790
Query: 1074 aagggagcatttaatatagctgtggccgctcaagtacctattataccagtcatcatatct 1133
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 791 aagggagcatttaatatagctgtggccgcacaagtacctattataccagtcatcatatct 850
Query: 1134 ccatactacttca 1146
|||||||||||||
Sbjct: 851 ccatactacttca 863
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,035
Number of extensions: 7620
Number of successful extensions: 7620
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7620
Number of HSP's successfully gapped: 1
Length of query: 1849
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1832
Effective length of database: 8,119,229
Effective search space: 14874427528
Effective search space used: 14874427528
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)