BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22441 (UTR included)
(2071 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1H10 918 0.0
BF01024B1D01 92 4e-18
>BF01011B1H10
Length = 469
Score = 918 bits (463), Expect = 0.0
Identities = 467/469 (99%)
Strand = Plus / Plus
Query: 471 gctatatagttcctttacaagctattaaatatgaatgatatcctgagaccggaattgctt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctatatagttcctttacaagctattaaatatgaatgatatcctgagaccggaattgctt 60
Query: 531 tggatagagggaaggtgctatagagtgcatgatccagcgacggaaataacagcctttcag 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggatagagggaaggtgctatagagtgcatgatccagcgacggaaataacagcctttcag 120
Query: 591 gaatacgatttatacgaaaacgatactccactaaacgaagtggatgaagacgatgatgac 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatacgatttatacgaaaacgatactccactaaacgaagtggatgaagacgatgatgac 180
Query: 651 acagcttatgagatagttatgatagatagcaacagatatacaactaatatccacgttcca 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagcttatgagatagttatgatagatagcaacagatatacaactaatatccacgttcca 240
Query: 711 aggcattacattggatcaataattggtaaaaaaggtgcaacaatcagtcgaattggtaga 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggcattacattggatcaataattggtaaaaaaggtgcaacaatcagtcgaattggtaga 300
Query: 771 gatacgaaaactgttatcaaaatacctcgacacggggaaaattcagatatatctattttc 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatacgaaaactgttatcaaaatacctcgacacggggaaaattcagatatatctattttc 360
Query: 831 ggacccagtattactaatgttaaagcagctatacggcgaatcaacattattgtgatggct 890
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 ggacccagtattactaatgttaaagcagctatacnncgaatcaacattattgtgatggct 420
Query: 891 gcaagaatgaagcagaaacccacacacttcatatccataccaatgaatg 939
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcaagaatgaagcagaaacccacacacttcatatccataccaatgaatg 469
>BF01024B1D01
Length = 783
Score = 91.7 bits (46), Expect = 4e-18
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 1964 aggcccagtttcaccaatcaatgataaaaaaaataatgtcttgttaaggcgtttgatgaa 2023
||||||||||||||||||||||| | || ||| ||| ||||||||||||||||||||| |
Sbjct: 289 aggcccagtttcaccaatcaatgtttaataaa-taacgtcttgttaaggcgtttgatgga 231
Query: 2024 ctattacatgtatcgagcgtcctaccacgcattaatgtctgt 2065
|| ||| ||||||||||| || |||||| | ||||||||||
Sbjct: 230 ctgttagatgtatcgagccgcccaccacgaactaatgtctgt 189
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,076
Number of extensions: 5537
Number of successful extensions: 5537
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5536
Number of HSP's successfully gapped: 2
Length of query: 2071
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2054
Effective length of database: 8,119,229
Effective search space: 16676896366
Effective search space used: 16676896366
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)