BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22448 (UTR included)
(2749 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1082_C1 1538 0.0
>BF14_1082_C1
Length = 865
Score = 1538 bits (776), Expect = 0.0
Identities = 782/784 (99%)
Strand = Plus / Plus
Query: 387 gttgaatttctgtttttagttaatttaattctttatagtcatggtttttatgttcctgga 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gttgaatttctgtttttagttaatttaattctttatagtcatggtttttatgttcctgga 141
Query: 447 gtggctccagtggagtttaaaaaaggtcaaagaatagaagttaaagcagtgaaaatgaca 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gtggctccagtggagtttaaaaaaggtcaaagaatagaagttaaagcagtgaaaatgaca 201
Query: 507 agtatacatacgcaattaccatacgagtattattccttacccttatgtattcctaaaaat 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agtatacatacgcaattaccatacgagtattattccttacccttatgtattcctaaaaat 261
Query: 567 ggaacatttatatacaaatcagaaaatttaggcgaagttttgagaggtgatcgtattgtg 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggaacatttatatacaaatcagaaaatttaggcgaagttttgagaggtgatcgtattgtg 321
Query: 627 aatactaattacgaagttcatatggcagagaatatcaaatgcaaacttttgtgtcacaaa 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aatactaattacgaagttcatatggcagagaatatcaaatgcaaacttttgtgtcacaaa 381
Query: 687 agaaataatccaatgaactggagcgtggaggaatctgagaaggttgcgagtcgaattgaa 746
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 382 agaaataatccaatgaactggagcgtggaagaatctgagaaggttgcgagtcgaattgaa 441
Query: 747 catgaatactttgtacatttattagttgataacttaccagttgcaacaaagattataaat 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 catgaatactttgtacatttattagttgataacttaccagttgcaacaaagattataaat 501
Query: 807 attgatacttctgaaagaactatagaacaaggatatcgtctaggttttatgtcaaaagga 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attgatacttctgaaagaactatagaacaaggatatcgtctaggttttatgtcaaaagga 561
Query: 867 aaggcatatataaataaccatctgaagcttcttctgaaatatcacagacacagtcaggat 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aaggcatatataaataaccatctgaagcttcttctgaaatatcacagacacagtcaggat 621
Query: 927 tcttacagagttgttggctttgaagttgagacattttctgtggacaaagatcacttgaca 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tcttacagagttgttggctttgaagttgagacattttctgtggacaaagatcacttgaca 681
Query: 987 ttcattgatgataactattgtcaaattggatcagacattaaaccacaacttgtaaatgag 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttcattgatgataactattgtcaaattggatcagacattaaaccacaacttgtaaatgag 741
Query: 1047 gatacgggaactaaattgtactttacatattctgtggaatggggagaatcagatattgaa 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gatacgggaactaaattgtactttacatattctgtggaatggggagaatcagatattgaa 801
Query: 1107 tgggcgtcaagatgggatatatatttgggcatgaaagatgttcaaatacattggttttct 1166
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tgggcgtcaagatgggacatatatttgggcatgaaagatgttcaaatacattggttttct 861
Query: 1167 attg 1170
||||
Sbjct: 862 attg 865
Score = 165 bits (83), Expect = 5e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 231 caccaatttaaaaatgttttgtttggatttatttttatgcactttttagcacagtaaaac 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caccaatttaaaaatgttttgtttggatttatttttatgcactttttagcacagtaaaac 60
Query: 291 aattttgtaaatatgttcaaagt 313
|||||||||||||||||||||||
Sbjct: 61 aattttgtaaatatgttcaaagt 83
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 405,490
Number of extensions: 8664
Number of successful extensions: 8664
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8664
Number of HSP's successfully gapped: 2
Length of query: 2749
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2732
Effective length of database: 8,119,229
Effective search space: 22181733628
Effective search space used: 22181733628
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)