BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22462 (UTR included)
(2005 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1F09 1429 0.0
>BF01026A1F09
Length = 778
Score = 1429 bits (721), Expect = 0.0
Identities = 754/767 (98%)
Strand = Plus / Plus
Query: 258 aagatccgttaagacttaactttgtcggtgtgataaaatataagatattgaaatgttata 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aagatccgttaagacttaactttgtcggtgtgataaaatataagatattgaaatgttata 71
Query: 318 cacttatttttaagaaaaacccgtaaaactaaatattttaagtacttaagcgtattttcc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cacttatttttaagaaaaacccgtaaaactaaatattttaagtacttaagcgtattttcc 131
Query: 378 ttaactacatacacatctatttttcatgaatttgacttttgtagcatcgtaatctatgga 437
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 132 ttaactacatacacatctatttttcatgaatttgacttttatagcatcgtaatctatgga 191
Query: 438 attaacattacgtggtagtttaagccaataaaaataaaccaaatatattgaatgtaatca 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 attaacattacgtggtagtttaagccaataaaaataaaccaaatatattgaatgtaatca 251
Query: 498 aatatggaattcctttcaatcttatactctttaataatctacggacttttagcagtggtt 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aatatggaattcctttcaatcttatactctttaataatctacggacttttagcagtggtt 311
Query: 558 gcactgcttcttattttggtcctgttcatttttattacaacttctccatatccaattgtt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gcactgcttcttattttggtcctgttcatttttattacaacttctccatatccaattgtt 371
Query: 618 gaacgtttcaaagaagaagaatattactatgaccctgtttcgaaacaaaaaaataaattt 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaacgtttcaaagaagaagaatattactatgaccctgtttcgaaacaaaaaaataaattt 431
Query: 678 cctagtattgagactccttacagcgtgaatcttagtgtaattgtacccgcttacaatgaa 737
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 432 cctagtattgagactccttacagtgtgaatcttagtgtaattgtacctgcttacaatgaa 491
Query: 738 gaagaaagattgacccctatgttggatgaagctttagagtttttagaaaatagggttaaa 797
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 492 gaagaaagattgacccctatgttggatgaagcgttagagtttttagaaaatagggttaaa 551
Query: 798 gaacatccttcatataaatatgagattattgttgtgagcgacggcagcagagataacaca 857
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gaacatccttcatatgaatatgagattattgttgtgagcgacggcagcagagataacaca 611
Query: 858 gtgaaactagttcaaagttatgttgaaaaatatggtagtgacaaactgagatgcttagat 917
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gtgaaactagttcaaagttacgttgaaaaatatggtagtgacaaactgagatgcttagat 671
Query: 918 ttaatgaagaatagaggaaaaggtggtgccgtgagattgggtgtacaaagtgcgagagga 977
|| |||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttgatgaagaatagannnnnangtggtgccgtgagattgggtgtacaaagtgcgagagga 731
Query: 978 gctgctatactatttgcagatgcagatggcgcatcaaaatttgaaga 1024
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gctgctatactatttgcagatgcagatggcgcatcaaaatttgaaga 778
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 326,938
Number of extensions: 7966
Number of successful extensions: 7966
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7965
Number of HSP's successfully gapped: 1
Length of query: 2005
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1988
Effective length of database: 8,119,229
Effective search space: 16141027252
Effective search space used: 16141027252
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)