BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22467 (UTR included)
(1618 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1B05 1344 0.0
>BF01012A1B05
Length = 841
Score = 1344 bits (678), Expect = 0.0
Identities = 681/682 (99%)
Strand = Plus / Plus
Query: 428 gcagatgacgggtcgtcaactaaaaattgactttagttatatagaacattagtcgaaatc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagatgacgggtcgtcaactaaaaattgactttagttatatagaacattagtcgaaatc 60
Query: 488 gtgtttagtaaatatgacgggaattttgccaaactaccaacgctttgttaatggagtacc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtttagtaaatatgacgggaattttgccaaactaccaacgctttgttaatggagtacc 120
Query: 548 cgtgccgtccatatctcgacgttcttttcgtcttcgtgaaaaatatttgattatatctgt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtgccgtccatatctcgacgttcttttcgtcttcgtgaaaaatatttgattatatctgt 180
Query: 608 acttttcacatttggaattgtgtggctaggcgcactgttttatttgccagagtttaaaac 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttttcacatttggaattgtgtggctaggcgcactgttttatttgccagagtttaaaac 240
Query: 668 ttctacgagtgtaaacgatagtgtttataatgtatacaaacgcatacagaaggcaggccc 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctacgagtgtaaacgatagtgtttataatgtatacaaacgcatacagaaggcaggccc 300
Query: 728 tgagctccttatgcctccaccgctcgctcagaatgaagtcggtgattttcctgtagttgg 787
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 tgagctccttatgcctccaccgctcgctcagaatgaagttggtgattttcctgtagttgg 360
Query: 788 tattgctcgtcacggtgaagaaggagatgatcctcatatagttgaagacaggaatcggct 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tattgctcgtcacggtgaagaaggagatgatcctcatatagttgaagacaggaatcggct 420
Query: 848 tcgtgctaaaattgatgaggacatgggtatgaaagtgttggagagacctcagttcgatgt 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgtgctaaaattgatgaggacatgggtatgaaagtgttggagagacctcagttcgatgt 480
Query: 908 tgcaccttcagcttcctcttcgaaaggtccaagtaagcctccagtggatgctattgaaga 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcaccttcagcttcctcttcgaaaggtccaagtaagcctccagtggatgctattgaaga 540
Query: 968 gccagtactcagtaataatgcaaacaaagatctcatatctgacaacctgcagtctcatag 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gccagtactcagtaataatgcaaacaaagatctcatatctgacaacctgcagtctcatag 600
Query: 1028 cctggttaagacatatcaagtgccgcctctagatgcaaacacagaccctgatgttcgtca 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cctggttaagacatatcaagtgccgcctctagatgcaaacacagaccctgatgttcgtca 660
Query: 1088 caaacgggacacagtgaaagag 1109
||||||||||||||||||||||
Sbjct: 661 caaacgggacacagtgaaagag 682
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,632
Number of extensions: 5068
Number of successful extensions: 5068
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5068
Number of HSP's successfully gapped: 1
Length of query: 1618
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1601
Effective length of database: 8,119,229
Effective search space: 12998885629
Effective search space used: 12998885629
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)