BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22505 (UTR included)
(2011 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1999_C1 1231 0.0
>BF14_1999_C1
Length = 730
Score = 1231 bits (621), Expect = 0.0
Identities = 636/641 (99%)
Strand = Plus / Plus
Query: 476 taaaggacttcaataacaataaaacatggcaaagttggaattagtgcaaaatttaattgg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 taaaggacttcaataacaataaaacatggcaaagttggaattagtgcaaaatttaattgg 149
Query: 536 ccataaaggtattgtttggaatgtatcgtggcatcctcttggtaacatgttttcgtcttg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ccataaaggtattgtttggaatgtatcgtggcatcctcttggtaacatgttttcgtcttg 209
Query: 596 tggagaagataaaattattaaactatggagtaaagaaggagataaatgggttacaaaaac 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tggagaagataaaattattaaactatggagtaaagaaggagataaatgggttacaaaaac 269
Query: 656 tgtgttggtggatggccaccaacgcaccataagagaagttgcctggtctccatgtggaaa 715
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgtgttggtggacggccaccaacgcaccataagagaagttgcctggtctccatgtggaaa 329
Query: 716 ttttttagcctcggcaagttttgatggaacaacagcaatttgggacaaaaagagtggtca 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttttttagcctcggcaagttttgatggaacaacagcaatttgggacaaaaagagtggtca 389
Query: 776 atttgaatgcaatgcgacccttgagggacatgagaatgaggttaagagtgtttcttggtc 835
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 390 atttgaatgcaatgcaacccttgagggacatgagaatgaagttaagagtgtttcttggtc 449
Query: 836 tccatctggaaatttactagctacttgtggaagagataaatcggtttgggtttgggaagt 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tccatctggaaatttactagctacttgtggaagagataaatcggtttgggtttgggaagt 509
Query: 896 ggctggtgatgatgaatatgtctgtgaggcagttctgaactcacataaccaggacgttaa 955
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 510 ggctggtgatgatgaatatgtctgtgaggcagtgctgaactcacataaccaggacgttaa 569
Query: 956 aaaagttgtatggcatccaacctcagacattctggcttcttcctcttatgataatactgt 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaaagttgtatggcatccaacctcagacattctggcttcttcctcttatgataatactgt 629
Query: 1016 gaaaatatacaaagaagatcagttagatagtgattggacctgtatagcaaccttgcaatc 1075
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 630 gaaaatatacaaagaagatcagttagacagtgattggacctgtatagcaaccttgcaatc 689
Query: 1076 acatgattccacagtttggagtttggctttcgataaaactg 1116
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 acatgattccacagtttggagtttggctttcgataaaactg 730
Score = 159 bits (80), Expect = 2e-38
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 172 ttattgaaacattttcgattgaagtatataagtacttcgtcattctacaaaaagctgtgg 231
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 2 ttattgaaacattttcgattgaagtttataagtacttggtcattctacaaaaagctgtgg 61
Query: 232 aagaaagacgagaaacagatttaataat 259
||||||||||||||||||||||||||||
Sbjct: 62 aagaaagacgagaaacagatttaataat 89
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,277
Number of extensions: 5070
Number of successful extensions: 5070
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5070
Number of HSP's successfully gapped: 2
Length of query: 2011
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1994
Effective length of database: 8,119,229
Effective search space: 16189742626
Effective search space used: 16189742626
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)