BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22508 (UTR included)
(1996 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B2G02 1049 0.0
>BF01019B2G02
Length = 537
Score = 1049 bits (529), Expect = 0.0
Identities = 535/537 (99%)
Strand = Plus / Plus
Query: 327 ttaaatataatatacctaataaagtaaattttaatataccgaggtaccaaaaacgtttaa 386
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaatataatgtacctaataaagtaaattttaatataccgaggtaccaaaaacgtttaa 60
Query: 387 gcgccaaattttatatatcccaatgcttaaatagttattaagttattagtttatattcaa 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgccaaattttatatatcccaatgcttaaatagttattaagttattagtttatattcaa 120
Query: 447 atctttgaaccgcggtaacctcaaacaacacacataatatttagtgttaatgcaatggat 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctttgaaccgcggtaacctcaaacaacacacataatatttagtgttaatgcaatggat 180
Query: 507 aacagtaacaaaatagtaccaccacatttaaatgctgaagtttatcgaactgatacgact 566
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacagtaataaaatagtaccaccacatttaaatgctgaagtttatcgaactgatacgact 240
Query: 567 ggaacaagcacgcagtcgtttttagactacatccgtatacacaatgatgggacactattg 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaacaagcacgcagtcgtttttagactacatccgtatacacaatgatgggacactattg 300
Query: 627 gttggatgttcagaactaactggaaggtactggaatggtggagcaaacatttttgacaag 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttggatgttcagaactaactggaaggtactggaatggtggagcaaacatttttgacaag 360
Query: 687 gctaaacagggtaaaaatgttggtagtggaacgaaaaaatgtatttacctcaccagcggc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctaaacagggtaaaaatgttggtagtggaacgaaaaaatgtatttacctcaccagcggc 420
Query: 747 actgctgatgggtgctttattgagagttccaataagattttattatgtgaagacagtgga 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actgctgatgggtgctttattgagagttccaataagattttattatgtgaagacagtgga 480
Query: 807 gcggtgagtatatggaataacaaagatgatgcttggaagcaatggagtgaagaacta 863
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcggtgagtatatggaataacaaagatgatgcttggaagcaatggagtgaagaacta 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 333,351
Number of extensions: 19848
Number of successful extensions: 19848
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19848
Number of HSP's successfully gapped: 1
Length of query: 1996
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1979
Effective length of database: 8,119,229
Effective search space: 16067954191
Effective search space used: 16067954191
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)